Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1705 ATGGAAGGCGGCGGGTCCACTCCGGCGGCGCCGATTCCGAACGCGAACGCGCCGCCGCCGTTTCTGAGCAAGACCTACGACATGGTGGAGGACCCTTCCACCGACGCGATCGTGTCGTGGAGCGCAACGAACAACAGCTTCATCGTGTGGGACCCACCCGAGTTCGCCAGAGACCTTTTGCCCAAATACTTCAAACACAACAACTTCTCCAGCTTCGTTAGACAGTTAAACACTTACGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAGGGTTTTTTGAGGGGTCAAAAGCACTTGCTTAGGAGTATAACAAGACGAAAACCTGCCCATGGCCAAAACCATCAACAGCCTCAGCAACCACATGGACAGAGTTCATCGGTAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGCTTGAGGAAGAGGTTGAGAGGCTTAAAAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGGTTGAGGCAGCAGCAACAGACCACTGATAACCAGATGCAAACAATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAGCAGCAAATGATGTCATTCCTTGCAAAAGCTGTCCAGAGCCCTGGCTTCTTTGCTCAGTTTGTACAACAGCAAAATGACAGCAATAGGCGCATAACTGAAGTCAACAAAAAGCGTCGGCTTAAACAGGAAGGTATGGCTGAAACAGAGCATGCTGCTGCTCCAGATGGACAAATTATTAAATATCAACCTATGATGAATGAAGCAGCAAAAGAAATGCTTAGGCAGGTCATGAAATGGGATACTTCTCGTGTAGAATCTTTAAATAAAAATTCTGATAACTACATGATTGGTGATGCTTCATCATCTTCCAGTGGAATGGACAGTAGCAGCTCTTCAGGCTGGACTTCTGGAGTAACTCTTAAAGAGGTCTCTCCAGCTTCGGTGCAGTCTTCACATATTCAAGCTGCAACTGGGACTCAAGGGCATGTCCCCTCAATCGTTAAACCTGAAATTTTATCAGTATCACAAGCAGTAGCTTCTGAAAAAGTTATGAATGATGGAGCACATGATCCACCTTCTATCCCTGTTTCTCGAGCAGATGTAATGATCCCTGATCTTCCTTCAATAACAGAGATGGTTGCAGGAAATATTCTTGATATTCCTGAAGAAAATTATATGGCAACTGAGACAGATGAGGGATATATGGATCCTTCATTGGGGGCTGGGGGGTCATTTCCCATTGATTTTGAAGGTATTTCACCCGATGCAGACATTGATGATTTGTTAGCCAATCCTATTTGGGATGAAATTTTGCAAACTTCAGTTCCAGAGGATATTGATACCAATGTGGCCGAAGTATCCAAAGGGAATGAGGTCCAGCCAACGGAAAATGGATGGAACAATACTCGACATATGGATCACCTTACTGAGCAGATGGGTCTTCTTTCTTCCAATGCAAAAAGACCATGA 1473 0.4576 MEGGGSTPAAPIPNANAPPPFLSKTYDMVEDPSTDAIVSWSATNNSFIVWDPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRSITRRKPAHGQNHQQPQQPHGQSSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLRQQQQTTDNQMQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNDSNRRITEVNKKRRLKQEGMAETEHAAAPDGQIIKYQPMMNEAAKEMLRQVMKWDTSRVESLNKNSDNYMIGDASSSSSGMDSSSSSGWTSGVTLKEVSPASVQSSHIQAATGTQGHVPSIVKPEILSVSQAVASEKVMNDGAHDPPSIPVSRADVMIPDLPSITEMVAGNILDIPEENYMATETDEGYMDPSLGAGGSFPIDFEGISPDADIDDLLANPIWDEILQTSVPEDIDTNVAEVSKGNEVQPTENGWNNTRHMDHLTEQMGLLSSNAKRP* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1705 490 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 11 476 - -
Gso9g1705 490 ProSitePatterns HSF-type DNA-binding domain signature. 60 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso9g1705 490 Coils Coil 139 166 - -
Gso9g1705 490 MobiDBLite consensus disorder prediction 111 131 - -
Gso9g1705 490 MobiDBLite consensus disorder prediction 1 20 - -
Gso9g1705 490 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 476 IPR027725 -
Gso9g1705 490 Gene3D - 14 111 IPR036388 -
Gso9g1705 490 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso9g1705 490 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso9g1705 490 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso9g1705 490 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso9g1705 490 MobiDBLite consensus disorder prediction 113 130 - -
Gso9g1705 490 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Gso9g1705 490 SUPERFAMILY "Winged helix" DNA-binding domain 16 110 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1705 Gso-Chr9 41476282 41479959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1705 8 484 HSF AT1G32330 55.375 6.07e-171 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Gso9g1705 HSF_DNA-bind 3.2e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1705 K09419 - gmx:100794897 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0142 1 1577833 1581532 Gso9g1705 9 41476282 41479959 GST