Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1686 ATGGTTAGAATTAGAACGCCGTGTTTGCGAAAAAGTGGGCGTTTCGCGGAAGGCTCGCACTCACTCTCACTCGTTCTGTCCCTAAAATTAAAATTCACCCTAAATGCACTCCAAATAAATCCAAAACTCGAATATCTCCTTATTCTCTCTCTTCCCAATCTCAATCCCAGTGAGTGCTTTCTTTCTGTAACTAACCCCAATCATCAACTCAGTCAGCGAATGAATCTGTGGACGGACGAGAACTCCTCGGTGATGGAGGCCTTCATGCCATCCTCCGATCTCTCCTCCATCTGGCCCCCTCCCGCTCCTCCGCAGCCGCAATCCACGGCGGTCTTCAATCAGGACACCCTCCAGCACCGCCTCCAGGCCTTAATCGAGGGCGCCCGAGAGACCTGGACCTACGCCATCTTCTGGCAGTCCTCTTACGACTATTCCGGCTCCACTCTCCTCGGTTGGGGCGACGGTTACTACAAAGGCGACGACGACAAAGCCAAGGCAAAGGCCAAGTCCAAAGCCACCTCCGCCGCCGAGCAGGACCACCGCAAAAAGGTTCTCCGGGAACTTAACTCCCTCATCTCCGGCTCCTCCTCCGCTTCCGCCTCCGATGACGTCGACGAGGAAGTCACCGACACCGAGTGGTTCTTCCTCGTCTCCATGACGCAGTCCTTCGTCAACGGCGGAGGACTGCCCGGACAGGCCTTCTTCAACTCGACCCCCGTTTGGGTCACCGGGAGTGACCGTCTCTCTGCCTCGCCCTGCGAGAGGGCGAGGCAGGGACATATGTTCGGCTTGCAAACCTTAGTTTGCATACCGTCCGCGAACGGCGTCGTTGAACTGGGTTCCACCGAGTTAATTTTCCAGAACTCGGATCTGATGAACAAGGTGAAGGTTCTCTTCAATTTTAGCAACAACAACTTCGACATGGGTTCTTCTTGGCCCGCCACCAGCGCCGATCAAGGCGAAAACGACCCTTCCTCGCTCTGGCTCAGCGATCCCGAAGTTAGGGATTCCGTTAACACTGCTGCTGCTACCCCTTCGGTCATGGTTCCTGCACAGACTCAGGGGATTTCGATTTCAAAGACGATGCAGTTAGAGAGTTCTATTCAAACCCCTGGTTCGAGTACTTTAACCGAAACCCCTAGTTCTATTCACGCGATTCCGCAGAACCAGAGCGTGTTCTCCAGAGAATTGAACTTCTCTGAGTACGGGTTCGACCCAAAGAGTGGGAACAATCAGAATCACCATTCTCTGAAGCCGGAATCCGGCGAGATTCTCAGCTTCGGCGAGAGCAGGAGAACCTCCTACGGCGGCGTCAATGGGAATACTAATACCAATACCAATTCCAATTCCCATTTTTTCTCCGGCCAGTCACCGTTTGTTGCTGCTGTGGATGAAAACAAGAAGAATAACATGAGCAACAACGGGAAGAAAAGGTCACCGAATTCGCGTGGCAGCAACGACGATGGAATGCTTTCTTTCACCTCCGGCGTGATTATTCCGGCCACGAATTTGAAGTCCGGCGGAGGCGGCGATTCCGACCACTCGGATCTGGAGGCTTCGGTGGTGAAGGACCCGGTGGTGGAGCCGGAGAAGCGGCCGCGTAAGAGAGGGCGGAAGCCGGCGAACGGAAGAGAGGAACCATTAAACCATGTTGAAGCAGAGAGACAGAGGAGGGAGAAGCTGAACCAGAGATTCTACGCGCTTCGTGCTGTGGTTCCCAACGTGTCAAAGATGGACAAAGCGTCGCTTCTGGGCGACGCGATATCTTACATCACCGAGCTGAAGTCCAAGCTTCAGACCCTCGAATCTGATAAAGATGTATTGCATAAGCAGCTTGAAGGAGTGAAGAAGGAACTCGAGAAAACAACCGATAACGTTTCTTCTAATCACGCGTGTAATAATAACAATAACAACAAGTTGTCGTCGAATCAGCCGGCGTTAATTGACTTGGTTGAGATGGACGTGAAGATCATTGGTTGGGACGCGATGATAACGATCACATGCAGCAAGAAGAACCACCCCGCGGCGACGTTGATGACGGCATTGATGGAGTTGGACTTGGACGTGCACTACGCCACCGTAACGTTGGTCAACGATTTGATGATCCAACAAGCAACGGTGAAGATGGGAAGTAGATTTTACACGCAGGAGCAGCTTCGAGCGGCGCTGTCGGCTAAGGTTGGGGATGTACGATGA 2196 0.5291 MVRIRTPCLRKSGRFAEGSHSLSLVLSLKLKFTLNALQINPKLEYLLILSLPNLNPSECFLSVTNPNHQLSQRMNLWTDENSSVMEAFMPSSDLSSIWPPPAPPQPQSTAVFNQDTLQHRLQALIEGARETWTYAIFWQSSYDYSGSTLLGWGDGYYKGDDDKAKAKAKSKATSAAEQDHRKKVLRELNSLISGSSSASASDDVDEEVTDTEWFFLVSMTQSFVNGGGLPGQAFFNSTPVWVTGSDRLSASPCERARQGHMFGLQTLVCIPSANGVVELGSTELIFQNSDLMNKVKVLFNFSNNNFDMGSSWPATSADQGENDPSSLWLSDPEVRDSVNTAAATPSVMVPAQTQGISISKTMQLESSIQTPGSSTLTETPSSIHAIPQNQSVFSRELNFSEYGFDPKSGNNQNHHSLKPESGEILSFGESRRTSYGGVNGNTNTNTNSNSHFFSGQSPFVAAVDENKKNNMSNNGKKRSPNSRGSNDDGMLSFTSGVIIPATNLKSGGGGDSDHSDLEASVVKDPVVEPEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYITELKSKLQTLESDKDVLHKQLEGVKKELEKTTDNVSSNHACNNNNNNKLSSNQPALIDLVEMDVKIIGWDAMITITCSKKNHPAATLMTALMELDLDVHYATVTLVNDLMIQQATVKMGSRFYTQEQLRAALSAKVGDVR* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1686 731 MobiDBLite consensus disorder prediction 467 501 - -
Gso9g1686 731 MobiDBLite consensus disorder prediction 467 555 - -
Gso9g1686 731 PANTHER MYC 105 727 IPR045084 GO:0003700|GO:0006355
Gso9g1686 731 MobiDBLite consensus disorder prediction 432 455 - -
Gso9g1686 731 Coils Coil 591 625 - -
Gso9g1686 731 SMART finulus 551 600 IPR011598 GO:0046983
Gso9g1686 731 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 117 299 IPR025610 -
Gso9g1686 731 CDD bHLH_AtAIB_like 542 618 - -
Gso9g1686 731 Gene3D - 537 626 IPR036638 GO:0046983
Gso9g1686 731 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 548 614 IPR036638 GO:0046983
Gso9g1686 731 Pfam Helix-loop-helix DNA-binding domain 549 594 IPR011598 GO:0046983
Gso9g1686 731 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 545 594 IPR011598 GO:0046983
Gso9g1686 731 MobiDBLite consensus disorder prediction 430 455 - -
Gso9g1686 731 PANTHER TRANSCRIPTION FACTOR MYC2 105 727 - -
Gso9g1686 731 MobiDBLite consensus disorder prediction 516 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1686 Gso-Chr9 41263562 41266134 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1686 67 728 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 52.609 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso9g1686 bHLH-MYC_N 5.7e-56 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1686 K13422 - gmx:100790168 1269.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0809 1 31275515 31278026 Gso9g1686 9 41263562 41266134 GST