Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1651 ATGGCAACCACGGATAATAACGTGAAAGAGTTTACGAGCGACGACGAGGCATCTCCGAGGGCGATTCTGGAGACCCCTGTTTCGGAAACAGAGTCAGACAACAGTGGAAGCAGCGAAAGCTTCAGTTGTGTCTCACCGGAGAAGTCGCAGGCGGTGACCGGAAAAGAGGTTCCCAAGGAAGGTTACGTGCAACAGTTGATGACCATGATCGACGTTTTCAAGTTCAAGTCTGTGAGAAAGTTAACGGCCGTTCCTCTGTTTGCGGTGGGCAATGATATCTCTCGGAAAGGGTTAACCAAAAAACTTGCCCGTATTCGAAGTGCTGAAGATGGTATTGATATTGGAGCTATTCCCACGAAACCCTCTTGGAGGAACTTCGATTATGAAGAGTTAGTTGCTGCTACTGGTGATTTTAGTTCTGAGAACTTGCTTGGGAAAGGTGGTCATGCTGAAGTGTACAAAGGCCACTTACCCGATGGTCAAGTTATAGCTGTAAAGAGGCTAATGAAGAATGAAAAGGATGCTGCAGACAGAGCTGGTGATTTCTTGACGGAGCTTGGGATCATTGCACACATAAACCACCCCAATGCGACACGCCTTATTGGGTTCGGGGTTGATCGTGGCCTCTACTTTGTCCTACAGCTTGCTTCGCATGGCAGTCTTTCTTCTTTGCTTTTCGGTTCTGAATGCTTGGACTGGAAGATAAGATCCAAGGTAGCTGTTGGGGTGGCGGATGGATTGGTTTATCTCCATAAAGAGTGCCCGAGACGAATCATTCATAGGGACATCAAGGCCTCCAACATATTACTAAATGAAAACTATGAAGCTGAGATATCAGATTTTGGACTGGCAAAGTGGCTCCCAAGTAAGTGGACCAGCCACGTTGTCTTCCCAATAGAAGGAACATTTGGATATTTGGCTCCGGAGTACTTTATGCATGGAGTTGTGGATGAGAAAACTGATGTATTTGCCTATGGAGTTTTGCTTTTGGAGCTCATAACTGGTCGACGCGCTGTTGATTCGGATAGTAGACAAAGTCTTGTCATCTGGGCCAAGCCACTACTGGATACAAACAATGTAAAGGATTTAGCAGACCCCAGATTAGGAGAGGAATATGACCCTATTGAAATGAAGCGTGCCATGGTGACAGCTTCCAGGTGTGTCCACCATGTATCCTCCAAGCGGCCATACATGAATCAGGTTGTGCAGCTACTAAAGGGTGAAGAGACAATTATGGAACCAAAGAAAACTTTAGTTGCACAAAAGTCTCTCATGTTAGAGGCATGTGACCTAGAAGAAGATTATACTTGCTCAAGTTACTTGAAGGACCTCAATCGCCACAGGCAACTAATCATGGAGTAA 1362 0.4589 MATTDNNVKEFTSDDEASPRAILETPVSETESDNSGSSESFSCVSPEKSQAVTGKEVPKEGYVQQLMTMIDVFKFKSVRKLTAVPLFAVGNDISRKGLTKKLARIRSAEDGIDIGAIPTKPSWRNFDYEELVAATGDFSSENLLGKGGHAEVYKGHLPDGQVIAVKRLMKNEKDAADRAGDFLTELGIIAHINHPNATRLIGFGVDRGLYFVLQLASHGSLSSLLFGSECLDWKIRSKVAVGVADGLVYLHKECPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPSKWTSHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAYGVLLLELITGRRAVDSDSRQSLVIWAKPLLDTNNVKDLADPRLGEEYDPIEMKRAMVTASRCVHHVSSKRPYMNQVVQLLKGEETIMEPKKTLVAQKSLMLEACDLEEDYTCSSYLKDLNRHRQLIME* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1651 453 Gene3D Phosphorylase Kinase; domain 1 116 213 - -
Gso9g1651 453 Gene3D Transferase(Phosphotransferase) domain 1 217 425 - -
Gso9g1651 453 Pfam Protein kinase domain 139 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1651 453 SUPERFAMILY Protein kinase-like (PK-like) 121 411 IPR011009 -
Gso9g1651 453 SMART serkin_6 138 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1651 453 ProSiteProfiles Protein kinase domain profile. 138 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1651 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Gso9g1651 453 ProSitePatterns Protein kinases ATP-binding region signature. 144 166 IPR017441 GO:0005524
Gso9g1651 453 MobiDBLite consensus disorder prediction 1 55 - -
Gso9g1651 453 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 5 453 - -
Gso9g1651 453 PANTHER OS08G0249100 PROTEIN 5 453 - -
Gso9g1651 453 MobiDBLite consensus disorder prediction 25 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1651 Gso-Chr9 40839903 40845131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1651 126 401 Trihelix Transcription Factor Family AT1G68690 47.902 7.06e-73 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Gso9g1651 Pkinase 2.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1651 - - gmx:100775930 871.692