Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1643 ATGGCTCTTCCCGGTTCCCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGACTGCAGTAAACATTCGAGGGCTGCGGATCGTGGCAAATTACATTTATATAGTGCAGGTCCTTCATATCCTATTTCGTTCATGAGACAGGAATGCAGGGGTTTTCAACACCTTCGTCATATAAACAGGCCAGCACATACATTATCTTGCAAATCCCGCTCTTTTAAGTGTCATTGTTTTTTAGGCCAACCAAATGAGCTTCCTGCTGTTAAGGTGGCTGCTACAGTGTTGGCTAGGTCTTGTAATGTGTTACAAAATAGTCCTACCATAGTAAAGTTGATTCCTGCAGTTGGTGTTATCATTTTTGCAGTATGGGGTGTTGGTCCATTATTGTTTCAGACAAGGAAATTACTTTTTCAGAGGAGTGATAGTAGTTGGAAGAGAAGTACCACTTACTATATAATAACTTCTTACCTTCAGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGAGCATTGGAGCCATTAATCCTACCTTCAGAAACTAGCCAGGTTGTTAAGGAACGACTTTTGAATTTTGTAAGATCATTATCAACAGTACTGGCCTTCGCCTATTGTTTGTCAAGTGTAATTCAGCAAGCGCAGAAATTCTTAGCAGAGAGTACTGATGCAAGTGAGACGAGAAATATGGGATTCCAATTTGCTGGCAAAGCTGTTTACTCTGCGGTATGGATAGCTGCCTTTTCACTGTTCATGGAATTGCTGGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGTTGACCCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCGAGTGTGATGATTCATGCAACCCGGCCTTTTGTGGTTAATGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACCGTCGAGCATGTTGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGGAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGAGGAAAGTCTTAGCCAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCACTTTTGATTCTGGTGTCTTGTTTTGTTAAGACCTCACATTTTGAAGAATATCTGTGTGTTAAGGAAGCTGTACTGTTGGATCTTCTTAGAGTTATTGGCCATCACCGAGCCCGACTTGCCACACCAGTCCGTACCCTGCAGAAAATATACAGTGATGCTGACTTGGAGAACATACCATTTGCAGATTCGACATTTGGTCGTGGTGCTGGGACAGTACCTAACCGTCCATTATTAGTGATCGAACCATCTTATAAGATCAATGGAGATGATAAGAAAAGTCGATCGGCACGGCCAGCTGTTGATCAAGATAACAAGACAGCTACGCGAACCAAAGTTGACACTGAGGGGGATAACAAAGTTGTGACACCTAACTCTGATGCAAATGGAAACTCTAAGACAGTTGTGACTCCTAACTCTGATGCAAATGGAAACACTAAGACAGTTGTGACACCCAAACCTGATCCTGAAGTGGGTGAAAACAAGCCACTGAAATCAGATTCAAGCAGGGAGAACGTGGAGGTGCCAGAATCTCCTTCTAAATCCAAAGTTACTGGTTTGGTAGTGGATAATTCAGCCCAGAAGGACGTAGATGTCAAACAAGCCAAGGTTCATACCACTAAAAACACAAAGCCAAATATTGACTCTGACAATGTAGTGTCCTCCTCCTCAACTAACAATGCTGACAAAACTGGTGGATTTAATACGAATATGCCAATGAAACAGCAAGGGGAAAAGAAACCTGCTGCACAGCCTCATGCATCCAGGACTGTTCTTGAAGAGAATATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACACTTCCCATTGATGAAGAGATTGACAATGTGACATCTCGAGAGGCAAAGGAAATGGCTGCATTGCAGAGTGGAAATGGATCTCCAAAGGCTCCAGATGGAAATGACAACTAG 2160 0.4245 MALPGSLQLSHGLGLCRNLDCSKHSRAADRGKLHLYSAGPSYPISFMRQECRGFQHLRHINRPAHTLSCKSRSFKCHCFLGQPNELPAVKVAATVLARSCNVLQNSPTIVKLIPAVGVIIFAVWGVGPLLFQTRKLLFQRSDSSWKRSTTYYIITSYLQPLLLWTGAILICRALEPLILPSETSQVVKERLLNFVRSLSTVLAFAYCLSSVIQQAQKFLAESTDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAVLLDLLRVIGHHRARLATPVRTLQKIYSDADLENIPFADSTFGRGAGTVPNRPLLVIEPSYKINGDDKKSRSARPAVDQDNKTATRTKVDTEGDNKVVTPNSDANGNSKTVVTPNSDANGNTKTVVTPKPDPEVGENKPLKSDSSRENVEVPESPSKSKVTGLVVDNSAQKDVDVKQAKVHTTKNTKPNIDSDNVVSSSSTNNADKTGGFNTNMPMKQQGEKKPAAQPHASRTVLEENIVLGVALEGSKRTLPIDEEIDNVTSREAKEMAALQSGNGSPKAPDGNDN* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1643 719 MobiDBLite consensus disorder prediction 495 525 - -
Gso9g1643 719 Gene3D - 297 352 IPR023408 -
Gso9g1643 719 SUPERFAMILY Sm-like ribonucleoproteins 281 351 IPR010920 -
Gso9g1643 719 MobiDBLite consensus disorder prediction 526 558 - -
Gso9g1643 719 MobiDBLite consensus disorder prediction 566 585 - -
Gso9g1643 719 Pfam Mechanosensitive ion channel 238 444 IPR006685 GO:0016020|GO:0055085
Gso9g1643 719 MobiDBLite consensus disorder prediction 687 719 - -
Gso9g1643 719 MobiDBLite consensus disorder prediction 614 650 - -
Gso9g1643 719 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 719 IPR045042 -
Gso9g1643 719 Gene3D - 192 295 - -
Gso9g1643 719 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 1 719 - -
Gso9g1643 719 MobiDBLite consensus disorder prediction 495 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1643 Gso-Chr9 40765276 40772837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1643 9 715 Mechanosensitive Ion Channel Family AT5G10490 54.749 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1643 K22047 - gmx:100796304 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0207 1 2352890 2360363 Gso9g1643 9 40765276 40772837 GST