Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1639 ATGGGTCTCTGCTTCTCTTCCTCTTCCCCCAACCCTCCTCAGCAGTACTCAGGGTCTGCGAGCACTGACAGCAAGAACGTGGGATTCTCCGCGACCACGAGCAGCGCCGGGAAGAGCCAATTCTCGGAGATCGCGAGCGGGAGCATCGACAGCAGCCAAGGCTCTCTTCCTCTTCCTTCTCCTCATGGCCAGATTCTGGAAAGGCCGAACCTCAAGGTGTTCAGCTTCGGAGACCTGAAATCCGCCACCAAGAGTTTCAAGTCCGACACATTACTCGGCGAAGGTGGCTTTGGAAGAGTTTACAAGGGATGGTTGGACGAGAAGACCCTCTCCCCTGCTAAAGCTGGCTCCGGAATGGTCGTTGCCATCAAAAAGTTGAACCCCCAAAGCACCCAAGGCTTCCAAGAGTGGCAGTCAGAAGTGAACTTTTTAGGAAGACTTTCTCACCCAAATCTGGTCAAGTTGTTGGGTTATTGTTGGGACGATGATGAGCTTCTTCTAGTGTATGAATTCTTGCCAAAGGGAAGCTTGGAGAATCATCTATTCAGAAGAAATCCTAACATAGAACCACTTTCTTGGAACACCCGGTTTAAAATAGCTATCGGTGCAGCTCGGGGACTAGCTTTCTTGCACGCCTCCGAAAAACAAATCATATACAGAGATTTCAAGGCCTCAAATATACTTCTCGATGTGAATTTCAATGCAAAAATATCAGATTTTGGCTTGGCAAAATTGGGGCCTTCTGGAGGACAATCACATGTAACTACCAGGGTCATGGGCACGTATGGTTATGCTGCTCCAGAATACATAGCAACAGGTCACTTGTATGTGAAGAGTGATGTCTACGGATTTGGTGTAGTGCTTCTTGAAATACTGACAGGCATGCGGGCACTTGACACAAAACGGCCAACAGGGCAGCAGAACCTAGTTGAATGGACCAAACCTCTTCTCTCTTCCAAAAAAAAGTTGAAAACAATAATGGATGCTAAGATAGTGGGTCAATATTCACCCAAGGCAGCGTTTCAAGCAGCACAACTTACTCTAAAATGCCTAGAACATGACCCCAAACAACGTCCTTCTATGAAAGAAGTGCTTGAGGGATTGGAAGCCATCGAAGCTATCCATGAAAAATCCAAGGAATCCAAAACCTGCAATTCTTATCAACCTCCTCGGCAGAGAGTTGTGAGAGTATAA 1194 0.4715 MGLCFSSSSPNPPQQYSGSASTDSKNVGFSATTSSAGKSQFSEIASGSIDSSQGSLPLPSPHGQILERPNLKVFSFGDLKSATKSFKSDTLLGEGGFGRVYKGWLDEKTLSPAKAGSGMVVAIKKLNPQSTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFLPKGSLENHLFRRNPNIEPLSWNTRFKIAIGAARGLAFLHASEKQIIYRDFKASNILLDVNFNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGMRALDTKRPTGQQNLVEWTKPLLSSKKKLKTIMDAKIVGQYSPKAAFQAAQLTLKCLEHDPKQRPSMKEVLEGLEAIEAIHEKSKESKTCNSYQPPRQRVVRV* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1639 397 MobiDBLite consensus disorder prediction 1 37 - -
Gso9g1639 397 CDD STKc_IRAK 92 371 - -
Gso9g1639 397 Pfam Protein tyrosine and serine/threonine kinase 89 367 IPR001245 GO:0004672|GO:0006468
Gso9g1639 397 Gene3D Phosphorylase Kinase; domain 1 70 171 - -
Gso9g1639 397 SUPERFAMILY Protein kinase-like (PK-like) 63 369 IPR011009 -
Gso9g1639 397 PANTHER OS01G0588500 PROTEIN-RELATED 39 381 - -
Gso9g1639 397 ProSitePatterns Protein kinases ATP-binding region signature. 92 125 IPR017441 GO:0005524
Gso9g1639 397 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Gso9g1639 397 Gene3D Transferase(Phosphotransferase) domain 1 172 391 - -
Gso9g1639 397 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 39 381 - -
Gso9g1639 397 ProSiteProfiles Protein kinase domain profile. 86 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1639 Gso-Chr9 40714959 40719526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1639 72 368 Glycoside Hydrolase AT3G07070 51.342 1.86e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso9g1639 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1639 - - gmx:100794193 776.548