Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1636 ATGCCGAAAGCCAAATCCGACGCCAAAGCCGCCGATAGCCGGTTGAAGCGCAAGGGCGCTGGTGCTGGAAGGAAGCAATCGAAGAAAGCTGCTAAGGATCCTAACAAGCCAAAGAGACCTCCAAGCGCTTTCTTCGTTTTCATGTCCGAGTTCAGAGAGCAGTTTAAGAAGGAGCATCCTAACAACAAATCCGTCGCTGTTGTCGGTAAAGCTGGTGGTGACAAATGGAAATCGCTGTCTGATGCTGAAAAGGCCCCCTTCGTTGCCACGGCCGAAAAGAAGAAACAAGAGTATGAGAAAACTATTTTGGCTTACAATAAGAAATTGGAGGGGAAGAATTCAGAGGAAGACGAGTCTGACAAGTCAAAGTCTGAAGTCAATGACGATGAGGAAGATGAGGAGGAGGAGGATGATGATGACGACGAGTGA 429 0.4825 MPKAKSDAKAADSRLKRKGAGAGRKQSKKAAKDPNKPKRPPSAFFVFMSEFREQFKKEHPNNKSVAVVGKAGGDKWKSLSDAEKAPFVATAEKKKQEYEKTILAYNKKLEGKNSEEDESDKSKSEVNDDEEDEEEEDDDDDE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1636 142 Coils Coil 88 115 - -
Gso9g1636 142 SMART hmgende2 36 107 IPR009071 -
Gso9g1636 142 Pfam HMG (high mobility group) box 37 106 IPR009071 -
Gso9g1636 142 MobiDBLite consensus disorder prediction 122 142 - -
Gso9g1636 142 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 3 141 IPR031061 -
Gso9g1636 142 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 3 141 - -
Gso9g1636 142 Gene3D High mobility group box domain 21 122 IPR036910 -
Gso9g1636 142 MobiDBLite consensus disorder prediction 105 142 - -
Gso9g1636 142 MobiDBLite consensus disorder prediction 1 19 - -
Gso9g1636 142 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 37 106 IPR009071 -
Gso9g1636 142 CDD HMGB-UBF_HMG-box 37 102 - -
Gso9g1636 142 SUPERFAMILY HMG-box 28 110 IPR036910 -
Gso9g1636 142 MobiDBLite consensus disorder prediction 1 44 - -
Gso9g1636 142 MobiDBLite consensus disorder prediction 105 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1636 Gso-Chr9 40688670 40690178 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Gso9g1636 HMG_box 3.1e-23 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1636 K25507 K22507 gmx:100305957 217.238