Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1631 ATGTCGTGTTCTTCTTCATCTGGTTCTGAAGAGGACGATGAGGGGTTCGACTCTTACCGGAAAGGAGGGTACCACGCCGTAAGAGTCGCCGACCAGTTCGCCGGCGGCAGGTACATAGCGCAGAGGAAGCTCGGTTGGGGCCAGTTTTCAACAGTTTGGCTTGCCTATGATACTACTACATCTGCATATGTCGCTCTCAAGATCCAGAAAAGTGCGGCCCAGTTTGTTCAGGCTGCCCTTCATGAAATTGATGTTCTTACATCCCTTTCTGATGGTGCCGACATGGATTCAAAATGTGTTGTCCATTTGATTGATCACTTTAAGCACACAGGTCCTAATGGCCAGCACCTTTGCATGGTGCTTGAGTTTCTTGGGGATAGTTTGCTTCGTCTAATCAAATATAATCGGTACAAAGGCCTTCCATTGAATAAAGTTAGGGAGATTTGCAAGTGCATTTTGATTGGTTTGGATTATTTGCATAGAGAACATGGTATTATCCACTCAGACCTAAAACCAGAAAATGTTCTTCTGGTTTCTACCATTGATCCTGGCAAAGACCCCGTTAGATCTGGACTCACCCCAATATTAGAGAGGCCCGAGGGTAGCATAAATGGTGGTGGAGTTACTAGTCTTATTGAGAAAAAGTTGAAAAGAAGAGCTAGGAGGGCAGTTGCAAAAATATCTGGAAGAAGTTCTCCAATAGGAGGAATTGAAGCTCCAAAGTCTGAGAGAAATCTTGATGGGATTGATGTGAGATGCAAGGTGGTAGATTTTGGAAATGCTTGTTGGGCCGATAAGCAGTTTGCAGAAGAAATTCAGACAAGACAGTACAGAGCTCCTGAAGTAATACTGCACGCCGGTTATTCATTCTCTGTTGACATGTGGTCTTTCGCTTGCATTGCTTTTGAGCTTGCCACTGGTGATATGCTATTTACTCCCAAGGATGGACAAGGTTTTAGTGAGGATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCCCGGAAGGTTGCTACTTCTGGAGCAAAATCCAAGGATTTCTTTGACAGACATGGAGATCTCAGGAGGATTCGCAGACTAAAGTTTTGGCCGCTAAGCAAACTGTTGGTTGTTAGATATAAATTTTCAGAGCGTGATGCTCATGAGTTTTCAGAGTTTCTTTCACCACTTCTTGATTTTGCACCCGAGAAGCGGCCAACAGCACAGCAGTGCCTGCAACACCCATGGCTCCAGGGCATAGAGTCTACACCAAATGAAATGAGAAATGAATCTAGTGTGGAAAAGGTGGATGTTGGGATGAGCAACCTTCAAATCAAGGTGGGAAAGTGA 1338 0.4492 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVADQFAGGRYIAQRKLGWGQFSTVWLAYDTTTSAYVALKIQKSAAQFVQAALHEIDVLTSLSDGADMDSKCVVHLIDHFKHTGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCILIGLDYLHREHGIIHSDLKPENVLLVSTIDPGKDPVRSGLTPILERPEGSINGGGVTSLIEKKLKRRARRAVAKISGRSSPIGGIEAPKSERNLDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILHAGYSFSVDMWSFACIAFELATGDMLFTPKDGQGFSEDEDHLALMMELLGKMPRKVATSGAKSKDFFDRHGDLRRIRRLKFWPLSKLLVVRYKFSERDAHEFSEFLSPLLDFAPEKRPTAQQCLQHPWLQGIESTPNEMRNESSVEKVDVGMSNLQIKVGK* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1631 445 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 5 445 - -
Gso9g1631 445 Pfam Protein kinase domain 252 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1631 445 Pfam Protein kinase domain 39 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1631 445 SUPERFAMILY Protein kinase-like (PK-like) 32 423 IPR011009 -
Gso9g1631 445 ProSiteProfiles Protein kinase domain profile. 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1631 445 CDD STKc_SRPK 27 413 - -
Gso9g1631 445 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 5 445 - -
Gso9g1631 445 Gene3D Transferase(Phosphotransferase) domain 1 92 413 - -
Gso9g1631 445 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Gso9g1631 445 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Gso9g1631 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Gso9g1631 445 SMART serkin_6 38 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1631 Gso-Chr9 40635306 40640008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1631 4 428 EF-hand Containing Proteins AT5G22840 50.731 3.51e-169 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gso9g1631 Pkinase 3.7e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1631 K08832 - gmx:100814976 881.708