Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1626 ATGAAGTTTCTTCCTTTTCTCATTTCCTTCCTTTTTGCCTCCCTAATCGCAACCTCCGGAACGCCGCATCCCAATGAAGAACGCCTCAACATCCACAGTGCACTTCATCATCGACCCGCTTCCCGATCCCTTCTCTCTCTTCCACCTAAGGCTGCAACCACAGCACTGATTGTGACCCTAGATGGGACTATGTACTTGGTGGATCGATTGGAGAGTGGTTCCACGAGAGTCATATGGTCGTTCTCGACAGGATTGCCAATCTACCAATCATATCAAGCACCAACTAAAAAGGATAATGGTAAAGAAAATGCATCTGCAGCACTGATGAGTGGGTTCATGGAATGTGGGGAAGGGAATGACTGGTCATTGTATATGCACGACAAGCACTTTGGTAAAATGAGAATATCAGAATCTATTGCAGAATATGTAGCTCGTACACCTACCTTTTCAGATGATGGAGCAGTAACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAAGTGGATCAATCATTAAAATCCATGCGATGCCTGATTTTGATAATGCTTCTGCACCTTGTAGTGATGGAAAGCAGGGTGTCACAAATATCCTCAATGTAAAGAATAAGGACCTTGCTGATCCCATGAAGCTGAATTCACCTCAGCCGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTAGCTCAGGAATGGTTTTGTGGACTATGGCAGTAGCTGAATTTGAGGCTGTATTATTATGCCAACATACATCTTTTGATCTAGAGGATGAGTATGCTTCTGACAGTAGCCTCAATTTTAGGATGCCATACCCATGTCAAGAGATAAACCAAGTCTTTCGCCTGAAAAAGAATTTCCGGTTTGAACCTTCTCTAACTGAAAGACTACTTGTGGATCATGAAAATGATATGCTCTCGATGCCTAACTCAAAGCTAATGCTTCCTTCACAGCCAAATATTGATAGATTATTCAATGGTCATGATGATAATATGATGCTCCCTCAACCTCCTGTGGAGATTACAACACCAGGGGAAGTTTATCTGAACAGGACAAGTGAATGGCCAACTCCATTACCTCTTATATTGTTTACGGTCTTTCTTCTGGCCTTTTCACTCATCTATCCTCTAGTGATTGAGAACCAAGATATACTCAAGGACCAAGACAGTGAGTCTGAATTAAAAGGTTCACCTGCTAAGAAAAAGAAAACACGGAAATCAGGGAAGAAAAATGGCACTATCGATACAAGGGAAAAACACCTGTCTCCAGAGAATGAGGATGTTCTGACACAAAAGGATAATGAGAGAGAAGTATGGAAGCACTTCAATCAAGGTGATGAAAGTGTTGATGGACGAAGAATTGGTAAATTATTTGTTTCAAATAAAGAGATTGCTAAGGGAAGCAACGGTACCATTGTCCTTGAGGGAATATATGAATGCCGGGTAGTTGCCGTTAAACGTCTCGTCAAGTCTCATCATGATGTAGCTTATAAAGAAATCCAAAATCTGATTGTGTCTGATCATCATCCAAATATTGTTCGATGGCATGGAGTAGAGTATGATAGTGATTTTGTTTACCTTGCTTTGGAACGTTGTACATGCAATTTAGATGACTTGATTCAAATTTATTCAGATTTGTCAGAAAACTTTGCGTTTAGGAAGGACCAAGGTTTCAGATGTTTGATAAAGTCCCAAATGGAGATGGAGAAGTATAATACACAAAGTCTTTGGAAGGAAAACGGCTATCCATCTCCTCTATTACTAAAACTAATGAGGGACATTGTTTCTGGGGTTGTTCATTTGCATGAATTGGGAATGATACATCGGGATTTGAAACCACAAAATGTTCTTATAATCAAGGAAAGATCTTTGTGTGCAAAGCTTTCTGATATGGGGATTAGCAAATGTCTTCTTGAAAATATGTCTTCTTTGGGTAATAATGCTACTGGTGGTGGCAGTTCAGGTTGGCAGGCACCAGAACAACTTGTTCGAGGACGTCAAACCCGGGCAGTAGATGTATTTAGTTTAGGTTGTGTCCTTTTTTTCTGCATTACTGGAGGAAGACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAAAAATCAAATGGATCTTTTCTTATTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGTTGTTTATTAAACCCTAACCCTGATCTAAGGCCAAAGGCGACTGAAGTATTGTACCATCCTTTTTTCTGGAGTTCCGAGATGAGACTTTCCTTTTTACGTGACACCAGTGACAGGGTGGAACTGGAGAATAGAGAGACAAATTCTGATCTTTTGGTGACATTAGAAAGCGTTGCTACAGTGGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAACTTTCATTGCTAACATCGGTCATTACCGGCGGTACAATTTTAACAGTGTTCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTATAGAGAATTGCCTCGAGAAATCCAGGAACTTGTAGGACCTGTTCCTGAAGGATTCTTCAACTACTTTGCAAGTCGATACCCAAGACTCTTGATTGAAGTTTATAAAGTTATACTCCAATACTGCAAGGAGGAAGAATGTTTCCAAAGATATTTTAAAAATGTTGATTAG 2661 0.3995 MKFLPFLISFLFASLIATSGTPHPNEERLNIHSALHHRPASRSLLSLPPKAATTALIVTLDGTMYLVDRLESGSTRVIWSFSTGLPIYQSYQAPTKKDNGKENASAALMSGFMECGEGNDWSLYMHDKHFGKMRISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKSGSIIKIHAMPDFDNASAPCSDGKQGVTNILNVKNKDLADPMKLNSPQPLLKIFRTDYSLKSVGPSSGMVLWTMAVAEFEAVLLCQHTSFDLEDEYASDSSLNFRMPYPCQEINQVFRLKKNFRFEPSLTERLLVDHENDMLSMPNSKLMLPSQPNIDRLFNGHDDNMMLPQPPVEITTPGEVYLNRTSEWPTPLPLILFTVFLLAFSLIYPLVIENQDILKDQDSESELKGSPAKKKKTRKSGKKNGTIDTREKHLSPENEDVLTQKDNEREVWKHFNQGDESVDGRRIGKLFVSNKEIAKGSNGTIVLEGIYECRVVAVKRLVKSHHDVAYKEIQNLIVSDHHPNIVRWHGVEYDSDFVYLALERCTCNLDDLIQIYSDLSENFAFRKDQGFRCLIKSQMEMEKYNTQSLWKENGYPSPLLLKLMRDIVSGVVHLHELGMIHRDLKPQNVLIIKERSLCAKLSDMGISKCLLENMSSLGNNATGGGSSGWQAPEQLVRGRQTRAVDVFSLGCVLFFCITGGRHPFGERIERDINILKNQMDLFLLEFIPEAKDLISCLLNPNPDLRPKATEVLYHPFFWSSEMRLSFLRDTSDRVELENRETNSDLLVTLESVATVALGGKWDERMEPTFIANIGHYRRYNFNSVRDLLRVMRNKLNHYRELPREIQELVGPVPEGFFNYFASRYPRLLIEVYKVILQYCKEEECFQRYFKNVD* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1626 886 PANTHER IRE1-RELATED 5 882 IPR045133 GO:0004521|GO:0004674|GO:0030968
Gso9g1626 886 SMART PGNneu 815 869 - -
Gso9g1626 886 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Gso9g1626 886 ProSiteProfiles KEN domain profile. 753 884 IPR010513 GO:0004540|GO:0006397
Gso9g1626 886 MobiDBLite consensus disorder prediction 395 438 - -
Gso9g1626 886 Gene3D Transferase(Phosphotransferase) domain 1 569 752 - -
Gso9g1626 886 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 5 882 - -
Gso9g1626 886 MobiDBLite consensus disorder prediction 415 438 - -
Gso9g1626 886 Gene3D KEN domain 753 886 IPR038357 -
Gso9g1626 886 CDD RNase_Ire1 754 882 - -
Gso9g1626 886 Pfam Ribonuclease 2-5A 756 882 IPR010513 GO:0004540|GO:0006397
Gso9g1626 886 ProSiteProfiles Protein kinase domain profile. 464 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1626 886 Pfam Protein kinase domain 466 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1626 886 Gene3D Phosphorylase Kinase; domain 1 451 536 - -
Gso9g1626 886 SUPERFAMILY Protein kinase-like (PK-like) 460 769 IPR011009 -
Gso9g1626 886 SMART serkin_6 464 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1626 Gso-Chr9 40578866 40590844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1626 490 749 MAP Kinase Kinase Kinase AT3G06030 26.515 2.44e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Gso9g1626 Pkinase 2.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1626 K08852 - gmx:100788389 1775.37