Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1613 ATGACCCTTCAAGCTGATTCAGCACCAGTACCACCACCGCCACCGGATTCCGCAGCCACCAACGGCATCTCCCCCACCGCAGAGGAAGCCCCACAACCACTGTCACCACCACCGCCGCATCCAACCCCACCTCCAGAACTGCGCGTCCCAATATGGTGGCCGGAAGACGGGAACCTCAGCATGGATTGGGTGGACAACCTGATGCGGTGCTTCGATTGGTCCTCTCGGAACGTCCCACCCTCGGAGCTCCCTTCGGTTCTCCCCGTCGGAGTCTTCGATTCGCTCATCCTCGTCGCCTCCAAGATGCTCCACAAGGAGCCCAATTGCGTCACCGTAGACCCCTTCCGCCCTAGCTCCGATGATGATAACACTCCCTCCGCTGCCTCCTCTGTTGTCGTCGTCGGCGATGTTCACGGCCAACTGCATGATCTGCTCTTCCTCCTCCAAGATGCCGGGTTCCCCTCGCGGGATCGCATCTTTGTCTTCAATGGGGATTACGTGGATCGGGGAGCGTGGGGGCTTGAAACCTTCTTGCTCTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATTTGCTACGAGGGAATCACGAATCAAAATACTGTACATCAGTTTATGGTTTTGAGAAAGAAGTAATGGTAAAGTATGGCGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATAATAGCAGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGACGCCATCAAAGAGGTTTAAAGGAAAGAAGAACCGTAAGATTAATGTTAATCATGAGAGCAAAATTCTCTCTCTTGGTTCCTTGGAAGAATTGTCTAAGGCTCGGCGATCAGTTCTGGATCCTCCTTGGGAAGGCCCAAATTTGATTCCTGGTGATGTTTTGTGGTCCGATCCATCAAAAAATCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTGATGTGGGGTCCTGATTGTACTGAAGAATTTTTGAAGAAATACCAACTAAAGTTGATCATCAGGTCACACGAAGGTCCTGATGCTAGGGAAAAAAGGGATGGTCTTGAGGGAATGGATGAAGGTTACACTATTGATCATGTTGTAGATTCTGGAAAGCTGGTCACTGTTTTTAGTGCTCCAGATTACCCACAATTTCAGGCAACACAGGAGAGGTATAACAACAAAGGCGCCTATGTTGTCCTTCAACCACCGAATTTTGAAAATCCTATATTTCATGGATTTTCAGCAGTTACTCCAAGGCCGAAGGTGAATCCCTATTATGATTACAAAGAGGTGATAGACTCCGATGAAGAATTGGATTTGGCCTCCATGGTAACTTCCTGA 1380 0.4877 MTLQADSAPVPPPPPDSAATNGISPTAEEAPQPLSPPPPHPTPPPELRVPIWWPEDGNLSMDWVDNLMRCFDWSSRNVPPSELPSVLPVGVFDSLILVASKMLHKEPNCVTVDPFRPSSDDDNTPSAASSVVVVGDVHGQLHDLLFLLQDAGFPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVTPSKRFKGKKNRKINVNHESKILSLGSLEELSKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLMWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGLEGMDEGYTIDHVVDSGKLVTVFSAPDYPQFQATQERYNNKGAYVVLQPPNFENPIFHGFSAVTPRPKVNPYYDYKEVIDSDEELDLASMVTS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1613 459 PRINTS Serine/threonine phosphatase family signature 130 157 IPR006186 GO:0016787
Gso9g1613 459 PRINTS Serine/threonine phosphatase family signature 160 187 IPR006186 GO:0016787
Gso9g1613 459 PRINTS Serine/threonine phosphatase family signature 193 217 IPR006186 GO:0016787
Gso9g1613 459 PRINTS Serine/threonine phosphatase family signature 230 256 IPR006186 GO:0016787
Gso9g1613 459 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Gso9g1613 459 PRINTS Serine/threonine phosphatase family signature 384 400 IPR006186 GO:0016787
Gso9g1613 459 SUPERFAMILY Metallo-dependent phosphatases 82 433 IPR029052 -
Gso9g1613 459 Pfam Calcineurin-like phosphoesterase 130 358 IPR004843 GO:0016787
Gso9g1613 459 CDD MPP_PP7 53 440 IPR041754 -
Gso9g1613 459 Gene3D - 84 449 IPR029052 -
Gso9g1613 459 SMART pp2a_7 87 430 IPR006186 GO:0016787
Gso9g1613 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 44 456 - -
Gso9g1613 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 44 456 - -
Gso9g1613 459 MobiDBLite consensus disorder prediction 1 49 - -
Gso9g1613 459 MobiDBLite consensus disorder prediction 30 49 - -
Gso9g1613 459 ProSitePatterns Serine/threonine specific protein phosphatases signature. 194 199 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1613 Gso-Chr9 40453074 40459428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1613 42 350 Calmodulin-binding Proteins AT5G63870 69.032 1.07e-154 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1613 K04460 - gmx:100810695 908.286