Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1605 ATGATCACTGATGTGCCCCCATCTATGTCTCAAAACGGTAGGTCAAGCAGATATTCCTTTGGCTCTAGCAATGGCAATGGTGATACCCCTGCACAAAATGGTGCTGCTGTTATCAATGTTGATGACTATGATAGTGATAGCTCCAATTTTGCACCACCCACGCCATCAACTATGTCAATGGCTGTTCCAGCAGAACTTGCTGGAGCTGTACCCTTGATCAACAGATTCCAGGTGGATGGATTTTTAAAATTAATGCAGAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGTAGGGCCCCAAGTTCGAGAAAAAATTACATTTGAGGACATGTTGAGTTTTCAAAAGGATCCAATTCCAACATCACTGCTCAAGTTAAATGTCGATTTAGTAAGTCGGGCAACAAAATTATTCCAAATAATTTTGAAATATATGGGAATTGATCCATCAGATCGTGTAACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTAGGGAAACTGTACAAGCAAAGTTTGAAACGACCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAGCAAACAAGAAATAACCCCGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTGTGTGCATCCTCAATGTCTCCTAGTAAAGACATTAGCAGTTATCTATCAGAATACATTCATAACATAGCAAATGGTGTGGGTACTGATTCTGAGATCCAAGTCCTTGCATTAAATACATTAAATGCTCTAAAGCATTCTGTCAAGGCTGGTCCCAGACATATAATTCCTGGGCGTGAGGAGATTGAAGCTCTGTTGACAGGGAGAAAGCTTACAACTATAGTGTTCTTCCTAGATGAAACATTTGAAGAAATTACATATGACATGTCAACCACAGTTGCCGATGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCATCATATTCCAGCTTTAGTCTATTTGAATGTCGTAAAGTTGTTACTGGCTCCAAAGCACCTGATCTTGGGAATGAGGAGTACATTGGGTTAGATGAAAACAAATATATTGGGGATCTCCTGGTGGAGTTCAAAGCTGCAAAGGATCGAAGTAAAGGAGAAATCTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGCGAGTCAGATGAAGCTGTGACAGAGCCTATGTTTGTGCAATTGTCTTATGTACAAATGCAACATGATTATATTTTGGGAAATTACCCTATTGGAAGGGATGATGCTGCTCAGCTCTCTGCATTACAAATTTTGGCTGAGATTGGATTTCTCAACACACCAGAATCATGCACTGACTGGAATTCACTTCTGGAGTGTTTCCTGCCTAGACAAATTTCAATGACACGAGCAAAACGCGAATGGGAGTATGACATTCTTTCTCGTTATCGTTCATTGGAGAATCTGACAAAAGATGATGCGCGGCAACAATTTCTGCGTATATTGAGAGCACTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTTTTACCTGGTCGGATAATTTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGTAATACTGCAGTCTTCTTTAAAATGCGAGTTGCAGGTGTTCTCCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGCTGCGCCGTTATTCGAAAGCACGATCAGCTGCTGCTGGTGGTGGTTCTCTGAACGGAGACATTTCTAGTAATTCTAAACCTCCTAATATGGAATTATACGAGAAGCGTGTTCAAGAATTATCAAAACTTATTGAAGAATCTCAAAAAAATGCTGATCAACTGCTTGAAGAATTACGTGTGAAGCAAAAACAAGAAGAGAAAATGCAAGAAGAATTGGATGATTTGAAAGAATCCTTAAAAGCTGATAAGCAAAATCTGGATGCAGTTACAAGTGACCGTAATAGACTTTTATCATTATGCAATGAAAAAGATAAGGAACTACAGGCTGCTATTCTAGACAAAAGGAATATGGAATCTAGGATGTCCAAGTTAAATAATGCGGTGATAGAGAACACTGCCAAAAAGGATCTTGCTAATGCTGGAAATAGACAAGTGACTCAAAAGCTTGAAGATGAGCTAAAAGTTTGCAAATATGAGCTGCTATCAGCCAATGAAACTATCAAAAGCTTGAAAAGTGAAAAATTGGTTTTGGAACAGAAGTTATCTGCACTTCAAACGAGGAATGCTGGAGAGATTAGTTCCCTTCAATGGAAACTTGAGCAAGAACGCAAAGTTGTGAAGTCTGAAGCATATGAGCTTGAAAGAAAGATAGAAGGTTGTAGGCAAGAATTATTGGTTGCTAAGGCTACCATTTCAATGAAGGACTCTGAGTTGGCTGCATTGCAGAATAATTTGAAGGAATTGGAAGAATTGAGAGAAATGAAAGAGGATATCGACAGAAAGAATGAACAAACAGCTGCCATACTGAAAATGCAAGGGGCTCAATTAGCTGAAATGGAAACACTTTATAAGGAAGAACAGGTTTTAAGGAAGCGCTATTTTAATGTAATAGAAGACATGAAGGGCAAGATCAGAGTTTACTGTCGACTAAGACCTCTTAGTGAAAAAGAGATTGCTGAGAAAGAAAGAGAAGTTCTTACTGCCACTGATGAGTTTACAGTTGAATACCCATGGAAAGATGATAAACTGAAGCAGTACATATATGACCGAGTTTTTGATGCCGATGCAACTCAAGAAAGCGTATTTGAGGATACAAAGTATTTGGTGCAGTCTGCTGTAGATGGTTATAATGTTTGCATATTTGCCTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTATGGATCTGACAACAACCCTGGACTTACCCCTCGTGCAATTGCAGAACTTTTTAGAATTTTAAGAAGAGATAATAACAAGTATTCTTTTTCCTTAAAGGCATACATGGTGGAGTTGTATCAGGATACCCTTATAGATCTGTTACCAAAGAATGGAAAGCATTTAAAATTGGATATCAAGAAGGATTCAACGGGAATGGTAGTTGTGGAAAATGTGACAGTTATGTCTATTTCTACAATTGAAGAATTGAATAGTATAATACAAAGAGGATCTGAACGACGACATATATCTGGAACCCAAATGAACGATGAAAGTTCAAGATCTCATCTCATTCTATCGATTGTAATTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTACTGGGAGTCAGCTTAAGGAAGCTCAAAGCATTAACAAGTCATTATCAGCACTTGGAGATGTTATTAGTTCTTTGTCTTCTGGTGGTCAACACACACCATACAGGAATCACAAGTTAACCATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCGGCAGAATCAAATTTGGACGAGACAAATAACTCTCTTATGTACGCCTCACGAGTGAGATCCATTGTGAATGACCCCAGCAAAAATGTTTCCTCAAAAGAGGTAGCACGACTGAAGAAGTTGGTTGCATATTGGAAACAACAAGCTGGTAGAGGACTTGAGTATGATGATTTAGAAGAAATTCAAGATGAAAGACCAACTAAGGAGAATGGTAATGGCAATAGGTAA 3810 0.3845 MITDVPPSMSQNGRSSRYSFGSSNGNGDTPAQNGAAVINVDDYDSDSSNFAPPTPSTMSMAVPAELAGAVPLINRFQVDGFLKLMQKQIQSAGKRGFFSKRSVGPQVREKITFEDMLSFQKDPIPTSLLKLNVDLVSRATKLFQIILKYMGIDPSDRVTPISLDERVELVGKLYKQSLKRPELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMSPSKDISSYLSEYIHNIANGVGTDSEIQVLALNTLNALKHSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVADAVEELAGLIKLSSYSSFSLFECRKVVTGSKAPDLGNEEYIGLDENKYIGDLLVEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTEPMFVQLSYVQMQHDYILGNYPIGRDDAAQLSALQILAEIGFLNTPESCTDWNSLLECFLPRQISMTRAKREWEYDILSRYRSLENLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAAGGGSLNGDISSNSKPPNMELYEKRVQELSKLIEESQKNADQLLEELRVKQKQEEKMQEELDDLKESLKADKQNLDAVTSDRNRLLSLCNEKDKELQAAILDKRNMESRMSKLNNAVIENTAKKDLANAGNRQVTQKLEDELKVCKYELLSANETIKSLKSEKLVLEQKLSALQTRNAGEISSLQWKLEQERKVVKSEAYELERKIEGCRQELLVAKATISMKDSELAALQNNLKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMETLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEIAEKEREVLTATDEFTVEYPWKDDKLKQYIYDRVFDADATQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSDNNPGLTPRAIAELFRILRRDNNKYSFSLKAYMVELYQDTLIDLLPKNGKHLKLDIKKDSTGMVVVENVTVMSISTIEELNSIIQRGSERRHISGTQMNDESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISSLSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETNNSLMYASRVRSIVNDPSKNVSSKEVARLKKLVAYWKQQAGRGLEYDDLEEIQDERPTKENGNGNR* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1605 1269 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Gso9g1605 1269 Coils Coil 824 861 - -
Gso9g1605 1269 Gene3D - 1219 1266 - -
Gso9g1605 1269 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Gso9g1605 1269 Pfam FERM central domain 389 503 IPR019748 -
Gso9g1605 1269 MobiDBLite consensus disorder prediction 1 33 - -
Gso9g1605 1269 Coils Coil 700 720 - -
Gso9g1605 1269 SMART B41_5 279 503 IPR019749 -
Gso9g1605 1269 ProSiteProfiles Kinesin motor domain profile. 896 1216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1605 1269 SUPERFAMILY PH domain-like 503 591 - -
Gso9g1605 1269 CDD FERM_C_KCBP 500 607 - -
Gso9g1605 1269 Gene3D Kinesin motor domain 838 1217 IPR036961 -
Gso9g1605 1269 ProSitePatterns Kinesin motor domain signature. 1116 1127 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso9g1605 1269 Coils Coil 753 780 - -
Gso9g1605 1269 CDD FERM_B-lobe 398 496 IPR019748 -
Gso9g1605 1269 Gene3D - 501 609 IPR011993 -
Gso9g1605 1269 Pfam Kinesin motor domain 902 1216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1605 1269 MobiDBLite consensus disorder prediction 1249 1269 - -
Gso9g1605 1269 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 617 1269 - -
Gso9g1605 1269 SUPERFAMILY Prismane protein-like 839 900 IPR011254 GO:0003824|GO:0016491
Gso9g1605 1269 PRINTS Kinesin heavy chain signature 968 989 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1605 1269 PRINTS Kinesin heavy chain signature 1086 1103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1605 1269 PRINTS Kinesin heavy chain signature 1117 1135 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1605 1269 PRINTS Kinesin heavy chain signature 1166 1187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1605 1269 CDD KISc_C_terminal 894 1218 - -
Gso9g1605 1269 Gene3D - 282 386 - -
Gso9g1605 1269 SMART kinesin_4 894 1224 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1605 1269 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Gso9g1605 1269 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Gso9g1605 1269 Gene3D MyTH4 domain 98 280 IPR038185 -
Gso9g1605 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1242 IPR027417 -
Gso9g1605 1269 Gene3D - 395 496 IPR014352 -
Gso9g1605 1269 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Gso9g1605 1269 Coils Coil 623 685 - -
Gso9g1605 1269 MobiDBLite consensus disorder prediction 1 34 - -
Gso9g1605 1269 PANTHER KINESIN-RELATED 617 1269 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1605 Gso-Chr9 40362248 40372463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1605 51 1266 Calmodulin-binding Proteins AT5G65930 73.235 0.0 1812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1605 - - gmx:100807481 2408.25