Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1574 ATGGGGGAAGGTGGTGAAGGAGAAGGTGATTGCGCTCCGAAGAATGCGTCGTTGTCGGAAGTTGTTGCTCCGGCGAAGAAGCTGGCGCGGCAGCTTGATTTTACCGGCGCGCCGGAGCATCCGCAGCTGTCGCAACCGCCGCAGCTACCGGTGGCTGTGTTGCCGTTGCAGCCGCAGGCGCCTCATGCGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACTTTGAAATCAAAGATGCTACTCCAAAGAAGCAAAAACAGTGCAATTGTAAACACTCTAAATGCTTAAAGCTGTATTGTGAATGTTTTGCATCAGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTTCAACAATGTTGAAAATGAGGCTGCTAGACGAGAAGCTGTTGAAGCTACCTTAGAGCGCAATCCAAATGCATTTAGGCCCAAAATTGCTAGCAGTCCTCATGGAACACGTGATAGCAGGGAGGAGGCTGGGGAAGTTTTAATATTAGGAAAACATAACAAGGGGTGTCATTGTAAAAAATCTGGGTGCCTCAAGAAGTATTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTTCATGGAGATCAAAATAACAACATGGCATATATTCAGCAAGCGGCAAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTATTCATCGCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAACTCTTCTTTTGGCCTACAACCAAGGATCCATCCATTAGCAAGTTGGGACAACAGGTAAACCATGTCAGAGGTCCAGCACCTTCCTCATCCTTGTCACCTGTCTCAGGTGCTCGTGTTGGAACTGCCACATTAGGTCCTTCAAAGTTTATGTACAGGTCTCTTTTAGCAGACATTATACAACCACAGCACCTCAAGGAGCTATGCTCAGTTCTGGTTCTAGTATCAGGACAAGCTGCAAAGACACTTACAGACCAGAAAATTTTAATGGAAAAGCAAGCAGAAGATCAGACAGAAACCTCCCTTGCTTCTTCAAGTCAAGAGCAATTACCAAGTCAAAAGGAAGGTCGTGTTGAGAAGACTGTGGCAGATGATTGTTCGAGTGCAAACCAAACAGATAAAATTAGCCCAGATAATTCCAGTTCAGATGGTGCTGATGTCCCAAAAGGGAGACCAATGTCTCCTGGGACTTTAGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACGGCTGCCTCCCCCATTGCGCCAATGGCCCATGCTTGCAATACATCTTCACAATTTCCTTATGGACAAGAAATGACAGAGGTCTATGCTGAGCAAGAAAGGATCGTATTAACTAAGTTTAGAGATTTTCTCAATAGGGTTATCACCATGGGAGAAATAAACGAAACAAAGTGTTCTTCGTTGGCCAGAAATGAATTAGAGAGTCAAAAGGACCCAATCATCAATGGCATTGGAAATACCAGTTCTCAGATAGTGCTACAGCACGGAACCACTAGCAATGGTGTTACTAAACCTGCTGTTTCACCTTTGGCTACAACTTCGACATCTATGATCCCTGGTAATATTGCTGAAAATGGGGAGACCAAGGTGAAGATCGAAAAAGAGATATGA 1680 0.4435 MGEGGEGEGDCAPKNASLSEVVAPAKKLARQLDFTGAPEHPQLSQPPQLPVAVLPLQPQAPHARVGKPESPKSRSRPNFEIKDATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCFNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREEAGEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSKKRKGQELFFWPTTKDPSISKLGQQVNHVRGPAPSSSLSPVSGARVGTATLGPSKFMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKILMEKQAEDQTETSLASSSQEQLPSQKEGRVEKTVADDCSSANQTDKISPDNSSSDGADVPKGRPMSPGTLALMCDEQDTMFMTAASPIAPMAHACNTSSQFPYGQEMTEVYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARNELESQKDPIINGIGNTSSQIVLQHGTTSNGVTKPAVSPLATTSTSMIPGNIAENGETKVKIEKEI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1574 559 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 48 540 - -
Gso9g1574 559 MobiDBLite consensus disorder prediction 355 372 - -
Gso9g1574 559 ProSiteProfiles CRC domain profile. 88 212 IPR005172 -
Gso9g1574 559 MobiDBLite consensus disorder prediction 32 82 - -
Gso9g1574 559 SMART CXC_2 172 213 IPR033467 -
Gso9g1574 559 SMART CXC_2 87 127 IPR033467 -
Gso9g1574 559 MobiDBLite consensus disorder prediction 67 82 - -
Gso9g1574 559 PANTHER TESMIN/TSO1-RELATED 48 540 IPR028307 -
Gso9g1574 559 MobiDBLite consensus disorder prediction 354 418 - -
Gso9g1574 559 MobiDBLite consensus disorder prediction 384 403 - -
Gso9g1574 559 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 89 124 IPR005172 -
Gso9g1574 559 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 175 209 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1574 Gso-Chr9 40064881 40072990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1574 1 516 CPP Transcription Factor Family AT4G29000 56.672 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Gso9g1574 TCR 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1574 - - gmx:100777698 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0736 7 7972145 7981254 Gso9g1574 9 40064881 40072990 GST