Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1572 ATGTCAACTGCCCCCGCGCCGTCTTCGCCGCCGGCGAATAACGGCACCGCGCCTCCGCCGTCAACTCCGGCCACTCCCTCCGCACCGCCTCCCGCCACACCTTCCGCGCCGCCACCCTCAACTCCGTCGTCTCCTCCGCCGGCAACTCCGTCGTCTCCTCCGCCGGCGACACCTTCCTCGCCACCTCCGGCAACTCCTTCCTCTCCCCCTCCGGCGACTCCCTCTTCTCCTCCACCGTCCACTCCTTCTGCTTCTCCTCCACCGTCCACTCCAACCACGCCATCGACTTCTCCGCCGTCGCCGCCGTCGACATCGCCACCGTCGCCACCCAGTGGCGGCAGCACTCCGAGTCCACCGTCTCGGAGCTCGCCCTCTCCTCCGTCCGGATCGAGCCCGACCACTCCGTCGCCTCCGTCGTCTTCCTCGTCGAGCATTTCGACCGGCGTGGTGGTCGGAATCGCCGTTGGGGCTGTGGCGGTTCTTCTTGTGTTGAGCATTCTCTGCATATGCTGTCGGAAGAAGAAGAGAAGACGTGATGAAGAGTACCATGCTCCGCCGCCGCAGCAGCAGCAACCGCCGCGGGGACCTAAAGATGGTGCATATGGTGGTCCCCCAGGCCAATGGCAACACAATGTTCCTCCTCCTCAAGATCATGTGGTCTCAATGATGCCTCCAAAGCCATCGCCACCGCCTGCTCCACCAGCTTATGCTGGTCAACCTCCCCCACCACCGCCTCCTTTCATCATCAGCAGTGGCGGATCTGGATCAAACAATTCAGGCGGTGAATTTCTTCCTCCTCCTTCTCCAGGAATTTCATTGGGGTTCTCTAAGAGCACATTCACGTATGAGGAGTTGGCACGCGCAACTGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGAGGATTTGGATATGTGCACAGAGGAATTCTTCCCAACGGCAAGGAGGTGGCAGTGAAGCAATTGAAGGCTGGAAGCGGGCAAGGGGAGCGTGAATTCCAAGCTGAAGTTGAGATAATTAGCCGTGTCCATCACAAGCATCTTGTTTCTTTGGTTGGATACTGCATCACTGGGTCCCAGAGGCTGCTTGTTTATGAATTTGTTCCCAACAACACATTGGAATTCCATTTGCATGGAAAAGGGAGACCTACCATGGATTGGCCCACAAGACTAAGAATTGCTTTAGGATCTGCTAAGGGACTGGCGTATCTTCATGAAGATTGTCATCCTAAGATCATCCATCGTGATATCAAATCTGCCAACATCCTTCTGGATTTTAAGTTTGAAGCAAAGGTTGCAGATTTTGGTCTTGCAAAGTTTTCTTCTGATGTCAATACCCATGTTTCTACTCGAGTGATGGGGACTTTTGGGTATTTGGCTCCAGAATATGCTTCTAGTGGAAAACTCACAGACAAATCAGATGTTTTCTCCTATGGAATCATGCTCCTTGAGTTAATAACCGGACGACGGCCAGTTGATAAAAATCAAACTTACATGGAGGATAGTTTGGTAGATTGGGCTAGGCCTTTGCTCACACGAGCTTTGGAAGAGGATGATTTTGATTCTATTATTGACCCAAGGCTCCAGAATGACTATGATCCTCATGAGATGGCACGAATGGTGGCTTCTGCTGCGGCTTGCATACGTCATTCGGCAAAGCGTCGACCAAGGATGAGCCAGGTTGTCCGCGCTCTCGAAGGAGATGTCTCTCTAGCAGATCTGAATGAAGGAATAAGACCTGGACACAGCACTATGTATAGTTCTCATGAAAGCTCAGATTATGACACTGCACAGTACAAGGAAGACATGAAAAAGTTCAGGAAAATGGCATTGGGAACTCAGGAGTATGGTGCAAGCAGTGAGTACAGTGCCGCTACAAGTGAGTATGGTTTAAACCCATCAGGCTCAAGTAGTGAAGCACAGAGCCGCCAAACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAATCAAGGTTTCAGTGGAAGTTCTTGA 1995 0.5248 MSTAPAPSSPPANNGTAPPPSTPATPSAPPPATPSAPPPSTPSSPPPATPSSPPPATPSSPPPATPSSPPPATPSSPPPSTPSASPPPSTPTTPSTSPPSPPSTSPPSPPSGGSTPSPPSRSSPSPPSGSSPTTPSPPSSSSSSISTGVVVGIAVGAVAVLLVLSILCICCRKKKRRRDEEYHAPPPQQQQPPRGPKDGAYGGPPGQWQHNVPPPQDHVVSMMPPKPSPPPAPPAYAGQPPPPPPPFIISSGGSGSNNSGGEFLPPPSPGISLGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLRIALGSAKGLAYLHEDCHPKIIHRDIKSANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGIMLLELITGRRPVDKNQTYMEDSLVDWARPLLTRALEEDDFDSIIDPRLQNDYDPHEMARMVASAAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIRPGHSTMYSSHESSDYDTAQYKEDMKKFRKMALGTQEYGASSEYSAATSEYGLNPSGSSSEAQSRQTTREMEMRKMKNNQGFSGSS* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1572 664 Gene3D Phosphorylase Kinase; domain 1 272 367 - -
Gso9g1572 664 Gene3D Transferase(Phosphotransferase) domain 1 368 575 - -
Gso9g1572 664 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Gso9g1572 664 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 44 648 - -
Gso9g1572 664 CDD STKc_IRAK 298 567 - -
Gso9g1572 664 MobiDBLite consensus disorder prediction 617 664 - -
Gso9g1572 664 MobiDBLite consensus disorder prediction 617 644 - -
Gso9g1572 664 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 44 648 - -
Gso9g1572 664 ProSiteProfiles Protein kinase domain profile. 292 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1572 664 PRINTS Proline rich extensin signature 23 39 - -
Gso9g1572 664 PRINTS Proline rich extensin signature 43 55 - -
Gso9g1572 664 PRINTS Proline rich extensin signature 58 79 - -
Gso9g1572 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Gso9g1572 664 Pfam Protein tyrosine and serine/threonine kinase 297 565 IPR001245 GO:0004672|GO:0006468
Gso9g1572 664 MobiDBLite consensus disorder prediction 1 146 - -
Gso9g1572 664 SMART serkin_6 292 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1572 664 MobiDBLite consensus disorder prediction 218 249 - -
Gso9g1572 664 MobiDBLite consensus disorder prediction 176 270 - -
Gso9g1572 664 SUPERFAMILY Protein kinase-like (PK-like) 271 565 IPR011009 -
Gso9g1572 664 MobiDBLite consensus disorder prediction 11 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1572 Gso-Chr9 40031594 40035816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1572 106 647 Trihelix Transcription Factor Family AT1G70460 50.092 2.53e-174 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gso9g1572 PK_Tyr_Ser-Thr 9.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1572 - - gmx:732569 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0739 7 8008844 8013046 Gso9g1572 9 40031594 40035816 GST