Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1556 ATGGCTGCTCTCTCCAACGGCCACGGCTCTTCCTTCTTCAAGATGCCCCCAATCAAGTTCACAAAGCTCTTCATCAATGGGGAATTTGTTGATTCCCTTTCAGGGAGGGAGTTTGAAACAAGAGACCCTAGGACAGGGGAGGTGATTACAAGAATCGCAGAGGGAGCAAAAGAAGACGTTGATGTTGCTGTCAAAGCGGCACGTGCGGCTTTCGACTATGGTCCATGGCCCCGTATGCCCGGCGCTGAAAGAGCAAAAATTATGATGAAATGGGCAGACTTAGTTGATCAGAACATTGAGGAAATAGCAGCATTGGATGCCATTGATGCTGGAAAGTTGTACCATTGGTGCAAGGCTGTTGATATTCCTGCTGCAGCAAGTACTATCCGTTACTATGCAGGTGCTGCAGATAAAATTCATGGAGAGGTCTTAAAAGCTTCTAGGGAGTTCCATGCATATACTTTGCTAGAACCAATTGGTGTTGTGGGACACATTATTCCTTGGAACTTCCCTAGCACCATGTTTGTTGCGAAGGTTAGTCCTTCCTTGGCTGCTGGTTGCACAATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCGGCCTTGTTTTATGCTCATCTTGCTAAGCTGGCTGGAATTCCGGATGGAGTGCTTAATGTGGTACCTGGATTTGGCCAAACTGCAGGTGTTGCAATAAGCTTACACATGGACATTGATAAGGTAAGCTTTACGGGTTCGACAGAAGTGGGGCGTGAAGTAATGCGTGCTGCAGCTAATAGTAATTTGAAACCAGTTTCACTTGAACTAGGAGGCAAGTCACCCGTCATAGTTTTTGATGATGCTGATGTAGATAAAGCTGCTGAACTTGCTCTCCTGGGCATCCTATTTAATAAGGGAGAAATTTGTGTTGCGGGCTCCCGTGTGTTGGTTCAAGAAGGAATCTATGATGAATTTGAGAAGAAATTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAGAAGCAATTTGAAAAGATTCTTTCCTATATCGAACAAGGAAAGAAAGAAGGGGCAACTCTTTTGACAGGGGGCAAAAGAGTGGGCAACAAGGGTTACTACATTGAGCCTACAATTTTCTCTAATGTTAAGGAGGACATGCTCATAGTACAAGATGAAATATTTGGCCCTGTGATGGCTTTGATGAAGTTTAAGACTATTGAGGATGCAATTAAGATTGCCAACAATACAAGATATGGCCTAGCATCAGGCATTGTGACAAAGAGTTTGGACACAGCCAACACTGTGTCAAGGTCCATTCGTGCTGGCATTGTTTGGATCAACTGTTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGATTTTGGAATGGAAGCCCTACACAAGTATCTTCAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCCTGGCTTTGA 1506 0.4436 MAALSNGHGSSFFKMPPIKFTKLFINGEFVDSLSGREFETRDPRTGEVITRIAEGAKEDVDVAVKAARAAFDYGPWPRMPGAERAKIMMKWADLVDQNIEEIAALDAIDAGKLYHWCKAVDIPAAASTIRYYAGAADKIHGEVLKASREFHAYTLLEPIGVVGHIIPWNFPSTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGQTAGVAISLHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSLELGGKSPVIVFDDADVDKAAELALLGILFNKGEICVAGSRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVDKKQFEKILSYIEQGKKEGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMALMKFKTIEDAIKIANNTRYGLASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGMEALHKYLQVKSVVTPIYNSPWL* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1556 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 25 489 IPR016162 GO:0016491
Gso9g1556 501 SUPERFAMILY ALDH-like 13 497 IPR016161 GO:0016491
Gso9g1556 501 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 501 - -
Gso9g1556 501 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 267 274 IPR029510 GO:0016491
Gso9g1556 501 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 501 - -
Gso9g1556 501 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 295 306 IPR016160 GO:0016491
Gso9g1556 501 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 271 460 IPR016163 GO:0016620
Gso9g1556 501 Pfam Aldehyde dehydrogenase family 30 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1556 Gso-Chr9 39846093 39853520 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1556 4 501 Aldehyde Dehydrogenase Gene Family AT3G24503 70.060 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1556 K12355 - gmx:100791396 985.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0755 7 8208932 8215646 Gso9g1556 9 39846093 39853520 GST
Gso5g1973 5 42846343 42851966 Gso9g1556 9 39846093 39853520 PCT
Gso8g0331 8 3099919 3104869 Gso9g1556 9 39846093 39853520 PCT
Gso9g1556 9 39846093 39853520 Gso5g1973 5 42846343 42851966 PCT
Gso9g1556 9 39846093 39853520 Gso8g0331 8 3099919 3104869 PCT