Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1555 ATGCCCACCACCAAGTTCACCAAGCTCTTCACCAATGGAAATTTTGTTGATTCACTTTCAGGAGGAGAATTTGAGACAATAGACCCAAGAACCGGAGAGGTGATTGCAAGGATTGCAGAGGGAACCAAAGAAGACATTGACCTTGCCGTCAAAGCGTCTCGTCTGGCTTTCGACCATGGTCCATGGCCTCGTATGCCTGCCGTAGAAAGAGCAAGAATTATGATGAAATGGGCTGACCTAATTGACCAACACGTAGAAGAAATTGCAGCACTGGATGCCATTGATGCTGGAAAGTTGTACCATATGCTTAAGGCTATTGAAATTCCTGCAACAGCAAATACTATACGTTATTATGCTGGTGCTGCTGATAAAATTCATGGAGAGGTATTAAAGCCGGCACGGGAGTTCCATGCATATACTTTACTTGAACCAGTTGGTGTTGTGGGACATATCATTCCTTGGAATTTCCCTAGCATCATGTTTGTCTCCAAGGTTAGCCCTTGCTTGGCTGCTGGTTGCACAATGGTCCTCAAGCCTGCTGAACAAACACCTCTTTCAGCTTTGTTTTATGCTCATCTAGCTAAACTGGCTGGAATTCCAGACGGAGTGCTCAATGTAGTCCCCGGATTTGGCGCAACTGCAGGTGCTGCAATATGCTCAGACATGGACATTGATAAGGTCAGTTTTACAGGTTCAACAGAAGTAGGGCGTGAAGTAATGCGTGCTGCAGCTAACAGTAATTTGAAACCAGTTTCACTTGAACTAGGAGGCAAGTCACCATTCATAATTTTTGATGATGCAGATCTAGATAAAGCGGTTGAGCTTGCTCTCATGGCCGTAGTATATAACAAGGGAGAAGTTTGTGCTGCAGGCTCCCGCGTATTTGTTCAGGAAGGGATCTATGATGAATTTGAGAAGAGGTTGGTGGAGAAGGCAAAAGCTTGGGTTGTTGGGGATCCCTTTGATCCTAATGTTCAGCAAGGGCCTCAGGTTGACAAAAAGCAATTTGAAAAAATTCTTTCCTACATCGAGCATGGAAAAAGAGAAGGGGCCACCCTTTTGACAGGGGGCAAAAGAGTGGGTAACAAGGGTTACTACATTGAGCCAACAATTTTCTCTAATGTTAAGGAGGACATGCTTATAGCACAAGATGAAATATTCGGTCCCGTGATAGCACTGATGAAGTTTAAGACAATTGAGGAAGCAATTAAAAGTGCTAACAACAGCAGATATGGCCTAGTAGCAGGTGTTGTGACCAAGAGCTTGGACACAGCAAACACAATGTCAAGGTCAATTCGTGCAGGGGTTGTTTGGATCAACTGTTATTTTGCCTTCGAAAATGACATTCCTTATGGAGGATGTAAGATGAGTGGATTTGGAAAAGATTCTGGATTGGAAGCCCTACACAAGTACCTACATGTTAAATCCGTTGTAACACCCATTTACAATTCTCCTTGGCTTTGA 1464 0.4385 MPTTKFTKLFTNGNFVDSLSGGEFETIDPRTGEVIARIAEGTKEDIDLAVKASRLAFDHGPWPRMPAVERARIMMKWADLIDQHVEEIAALDAIDAGKLYHMLKAIEIPATANTIRYYAGAADKIHGEVLKPAREFHAYTLLEPVGVVGHIIPWNFPSIMFVSKVSPCLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNVVPGFGATAGAAICSDMDIDKVSFTGSTEVGREVMRAAANSNLKPVSLELGGKSPFIIFDDADLDKAVELALMAVVYNKGEVCAAGSRVFVQEGIYDEFEKRLVEKAKAWVVGDPFDPNVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKRVGNKGYYIEPTIFSNVKEDMLIAQDEIFGPVIALMKFKTIEEAIKSANNSRYGLVAGVVTKSLDTANTMSRSIRAGVVWINCYFAFENDIPYGGCKMSGFGKDSGLEALHKYLHVKSVVTPIYNSPWL* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1555 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 253 260 IPR029510 GO:0016491
Gso9g1555 487 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 487 - -
Gso9g1555 487 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 487 - -
Gso9g1555 487 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 281 292 IPR016160 GO:0016491
Gso9g1555 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 475 IPR016162 GO:0016491
Gso9g1555 487 SUPERFAMILY ALDH-like 3 483 IPR016161 GO:0016491
Gso9g1555 487 Pfam Aldehyde dehydrogenase family 17 477 IPR015590 GO:0016491
Gso9g1555 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 257 446 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1555 Gso-Chr9 39834557 39842917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1555 1 487 Aldehyde Dehydrogenase Gene Family AT3G24503 68.852 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1555 K12355 - gmx:100791918 969.533