Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1552 ATGAAAATCGAAAAATTCCCCAAACTTCACACCGTACAAAACCCTAGCCCAATTTTACCCTTCCCCAAATTCAATTCCTTCAAATCCCTTCCCTATAATCTCGATTTTGCTTCGTGCAATCTCTCTTCGATCCCAATGGACGACATGGAAGACGACGCAAGGTACCCTCCCAAGTCCTTCTCCCTCAACCGGCAGAACCCTTCCCACCGCCACAAACACCCCATACGCGCCGCCCCCTACCACCGCCCAATGCCCACGCGCTACCAGGAACCCGACGATGATGAGGACGACAACGAACCCGACGATTTCGACGACGACGAAGCTGAAAACGGTTACGACGACGAAAACAACATCGCCGCGTATCCTCGGATCCCGAAGAAGCGCAAGGTAGTCGGCACTGCAGCGGCAGGAGGTTCTTACGAGTTCGCGCCACGTGTCAATTTCTCCTACGGAAACTCCCGCGGTTCGGGTTCGGGCGAGGAGTGGAACGAGCACGAGACTTTCGTACTGTTAGAAGTTTGGGGAGACAAGTTCCTCCAGCTCGGGAGGAACAGTTTGAGATCCGAGGAATGGCACGAGGTTGCAGAAAAAGTTTCCGAGGAATTGAAAACAGAGAGAACGGTGACACAGTGTAGAAGCGTGTTGGACAAGCTGAAAAGAAGGTACAGGAAAGAGAAGGCTAGAATGGACGAAATTGGCCTTGGCTCTTGTAAATGGGCCTTCTTCAAGAAGATGGACATGTTGATGGCTTCCTCCGCAAGGCAAGAGTATGGACTTGCTTGTGGTGTGGATTCCGGGGAGTACGTGTTTATGAACACTAGGGTTTACTTAAACAGTTCCAATGGGTTTGATGAGATGAGGGACAGTCCTGGGGAGTCTGAGAGCGATGATGACGATGAAGAGGAGGATATTGGTGGTGGTGGTGGTGGTGGGGATGAGGATGAGGAGGAGGACAAGATGTCATACCGCGTGTTGGCAGATTCGATTCAGAAGTTTGGGAAGATATACGAGAAGATTGAGAATAGTAAGAGGCAGCAGATGATGGAGCTGGAGAAGATGAGGCTGGATTTTAACAGGGAGCTGGAGCTGCAGAAGAAGCAGATCCTCGAGAGGGCGCAGGCCGAGATTGCCAAAATTCAGGAAGTGGATGAGGAGGATACCGACACTTCCGGTGGGGAGAATCTCAGTGAATGA 1194 0.5134 MKIEKFPKLHTVQNPSPILPFPKFNSFKSLPYNLDFASCNLSSIPMDDMEDDARYPPKSFSLNRQNPSHRHKHPIRAAPYHRPMPTRYQEPDDDEDDNEPDDFDDDEAENGYDDENNIAAYPRIPKKRKVVGTAAAGGSYEFAPRVNFSYGNSRGSGSGEEWNEHETFVLLEVWGDKFLQLGRNSLRSEEWHEVAEKVSEELKTERTVTQCRSVLDKLKRRYRKEKARMDEIGLGSCKWAFFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRVYLNSSNGFDEMRDSPGESESDDDDEEEDIGGGGGGGDEDEEEDKMSYRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEVDEEDTDTSGGENLSE* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1552 397 MobiDBLite consensus disorder prediction 290 315 - -
Gso9g1552 397 Coils Coil 336 385 - -
Gso9g1552 397 Pfam Myb/SANT-like DNA-binding domain 161 247 IPR044822 -
Gso9g1552 397 Gene3D - 162 224 - -
Gso9g1552 397 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 83 390 IPR044823 -
Gso9g1552 397 MobiDBLite consensus disorder prediction 281 322 - -
Gso9g1552 397 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 83 390 - -
Gso9g1552 397 MobiDBLite consensus disorder prediction 378 397 - -
Gso9g1552 397 MobiDBLite consensus disorder prediction 90 113 - -
Gso9g1552 397 MobiDBLite consensus disorder prediction 50 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1552 Gso-Chr9 39811983 39815491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1552 162 391 Trihelix Transcription Factor Family AT1G54060 30.325 2.24e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso9g1552 Myb_DNA-bind_4 4.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1552 - - gmx:100790166 721.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0757 7 8254431 8258101 Gso9g1552 9 39811983 39815491 GST