Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1549 ATGAGGAAGAAAACCTACTCCGACTTGTCTCTCTTTTTTCTTCCTCTCTTGCTCATTCTAGTTTCACACTCTCTCTGTGCCTCCGCATTCTCGCACAATGGACCTCTCACAGACTCCCAAGTGTCTTTCATCAAGCAGCGTCAGCTTCTGTATTACAAGGACTACTTCGGTGACAGAGGTGAAAAGGTAACCCTCGATCCCTCCTTCGTCTTCGAAAACGACCGTTTGAGAAACGCTTATATAGCGTTACAGGCGTGGAAGGAAGCCATTCTCTCCGATCCCAAGAACCTCACGCAGGACTGGGTGGGACCCAATGTCTGCAACTACTCCTACGTTTTCTGCGCTCCGGCGCCGGACAACCATAAGATCCGCACCGTCGCCGGAATCGACCTCAACCACGGCGACATTGCCGGATACCTCCCGGAGGAGCTAAGTTTACTCACTGACCTCGCTCTTCTCCACATCAACACTAACCGCTTCTGCGGCACTTTGCCGCACAAGTTCGACCGGCTGAAACTCCTCTTCGAGTTAGATCTCAGCAACAACCGCTTCGCCGGGAAGTTCCCCGACGTGGTGCTGCGCTTGCCGCTGCTCAAGTTTCTAGATCTGAGATTCAACGAATTCGAAGGTACGGTTCCCAAGGAGCTCTTCGACAAGGACCTGGACGCGATTTTCATCAATGACAACCGCTTCGTCTTCGACTTACCGGAAAATTTCGGAAACTCGCCGGTGTCGGTGATTGTGCTGGCGAACAACCGCTTCCACGGATGCGTGCCGGCGGGAATCGGCAAGATGAAGGGGCTGAACGAGATTATTTTGATGAACAACGCGTTCAAGTCGTGCTTCCCTGCGGAGATAGGGTTGCTGCAGAACTTGACGGTGTTCGATGTGAGCTTCAACCAGTTGCTGGGGCCTTTGCCTGATGCTATTGGTGGTGCGGTGAGTTTGGAGCAGTTGAATGTGGCGCATAACTTACTTTCGGGGAAGATTCCAGAGAGCATTTGTAAGCTTCCGAATCTGCAGAACTTTACTTACTCTTATAACTTCTTCACTGGCGAGCCGCCAAGATGTCTCGCTTTGCCGGCGTTTGATGACCGCCGCAACTGCCTTCCGGCCAGGCCTGCCCAGCGCTCCGCTGGGCAATGTAAGTCGTTTTTGTCGCACCCTGTCGATTGTAATTCGTTTAGGTGTAAGCCTTTTGTGCCTTCATTGCCTCCTCCTCCTCCTCCCTCACCACCATTGCCATCGCCGCCTCCGCCGTCGCCTGTTTACATTCCTCATTCCCCTCCACCACCCCCACCGCCGGTGTATTCGCCACCACCTCCACCACCAGTGTATTCGCCGCCTCCACCGCCTCCAACGTATTCGCCACCACCACCGCCACCGTCTCCTCCACCACCACCACCACCGGTTTATTCCCCCCCTCCGCCACCACCGTCCCCGCCTCCTCCTTCACCACCACCACCAGTTTATTCTCCACCTCCGCCACCACCTTCACCACCACCACCATCACCTCCTCCGCCTTCACCTCCACCACCAGTCTATTCACCACCTCCTCCACCACCTTCACCCCCCCCACCATCGCCGCCGCCACCATCACCACCACCACCCACGCCAACATATTGTGTAAGGTCTCCACCACCACCTTCACCGCCCCCGCCATCACCTCCACCTCCACCACCTCCAGTATTCTCCCCACCACCACCTGTGCAATACTATTATAGCTCACCACCACCTCCACAACACTCTCCACCGCCACCTCCACCTCATTCGCCACCGCCACCACCACATTCACCACCACCACCACCACCAGTTTATCCCTATTTATCACCGCCACCACCTCCTCCAGTTCACTCTCCTCCCCCACCAGTTTATTCACCACCACCGCCACCCCCATCTCCACCACCTTGTATAGAGTCACCTCCTCCGCCACCACCTCCACCACCTTGTGAAGAGCATTCACCACCACCACCATCACCACACTCTGCACCTTACCATCCGCCACCATCACCATCACCACCACCTCCCCCAATTCAATATAATTCACCACCACCACCATCACCGCCACCTCCAACACCTGTTTATCATTACAATTCACCGCCACCACCGTCATCTCCACCACCTGCACCTGTATATGAAGGGCCTTTGCCACCCGTCATCGGAGTCTCGTATGCATCTCCTCCTCCACCACCCTTTTATTGA 2202 0.555 MRKKTYSDLSLFFLPLLLILVSHSLCASAFSHNGPLTDSQVSFIKQRQLLYYKDYFGDRGEKVTLDPSFVFENDRLRNAYIALQAWKEAILSDPKNLTQDWVGPNVCNYSYVFCAPAPDNHKIRTVAGIDLNHGDIAGYLPEELSLLTDLALLHINTNRFCGTLPHKFDRLKLLFELDLSNNRFAGKFPDVVLRLPLLKFLDLRFNEFEGTVPKELFDKDLDAIFINDNRFVFDLPENFGNSPVSVIVLANNRFHGCVPAGIGKMKGLNEIILMNNAFKSCFPAEIGLLQNLTVFDVSFNQLLGPLPDAIGGAVSLEQLNVAHNLLSGKIPESICKLPNLQNFTYSYNFFTGEPPRCLALPAFDDRRNCLPARPAQRSAGQCKSFLSHPVDCNSFRCKPFVPSLPPPPPPSPPLPSPPPPSPVYIPHSPPPPPPPVYSPPPPPPVYSPPPPPPTYSPPPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPTPTYCVRSPPPPSPPPPSPPPPPPPVFSPPPPVQYYYSSPPPPQHSPPPPPPHSPPPPPHSPPPPPPVYPYLSPPPPPPVHSPPPPVYSPPPPPPSPPPCIESPPPPPPPPPCEEHSPPPPSPHSAPYHPPPSPSPPPPPIQYNSPPPPSPPPPTPVYHYNSPPPPSSPPPAPVYEGPLPPVIGVSYASPPPPPFY* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1549 733 MobiDBLite consensus disorder prediction 443 733 - -
Gso9g1549 733 PRINTS Proline rich extensin signature 401 422 - -
Gso9g1549 733 PRINTS Proline rich extensin signature 428 444 - -
Gso9g1549 733 PRINTS Proline rich extensin signature 447 464 - -
Gso9g1549 733 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 4 11 483 - -
Gso9g1549 733 SUPERFAMILY L domain-like 80 361 - -
Gso9g1549 733 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 11 483 - -
Gso9g1549 733 Gene3D Ribonuclease Inhibitor 80 240 IPR032675 -
Gso9g1549 733 Gene3D Ribonuclease Inhibitor 241 370 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1549 Gso-Chr9 39747575 39750790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1549 21 417 Leucine-rich Repeat extension Gene Families AT3G24480 72.864 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1549 - - gmx:106799218 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0761 7 8337603 8340627 Gso9g1549 9 39747575 39750790 GST