Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1514 ATGAATCCACCATCTAATAACCACACCATCGAACCCAGAGACTTGGGCAATTCAAGTGCCAATTTCAACGGAATTAACTCACTCCAGAGTAAGGTGTCATCCGAGGCAAAGTTTCAACATATTTTGCATAGCCCAGTTATGACAGAGCCATCAACTACATTAATAAGCCAAGTAGGTCATAAGTTCCCGGAGGTATTTCGACTGAGACAAGGAAGTTACGGAGATCTTCCTTCAGCAAAAATTTCAGAATTGATGAAATCAACTAGTTTGGATAATGCTCCTACCCAATCACTTTTGAGTGTAGTGAATGGCATCTTGGAAGAAAGTGTTGAAAGAAGAAATGGTGAAATACCCCATCGTGTGGCTTGCTTATTGAGAAAAGTTGTACAAGAGATTGAACGACGTATATCAACTCAAGCAGCACATCTAAAAACTCAAAATAACCTTTTTAAGGCGCGTGAAGAAAAATATCACTCAAGAATCAAAATACTTGAGGCCCTTACATTTGGAACCAAGGAAGAGAGTGAGGTTGGAAGGACTAAAAAAGAAGACAAGAAGATGGAAAATGATAAAGATGTTATTAGATATACTAAAGATATAGAGGACAAAAATATGGAAATTTCAACATTAAAGCAAGAACTAGAAACAATGAGAAAAACCTATGAAGTACAACTCTCACAGTTGGAAGCAAAAGCTGAGGCAGAAAAGAAAGTAGATGACAAAGAGATTATTAAATATGTTAAAGAGTTGGAGGACAAAAATATGGAAGTTTTGACGTTAAAGAAAAATTTAGAAACAATGAAAAAAACATATGAAATACAATGTTCACAGTTGGAAGCAAAAACTGAGAAGGAAAAAATGGCAGATGACAAAGGGGTTATTAAATATATTAAAGAGTTGGAGGACAAAAATGTAGAAATTTTAGCATTTAAGCAGGAACTAGAAACATTGAAAAAAACATATGAAGTAAAATGCTCACAATTGGAAGCAAAAGTTAACGAGAAAGAAAATGTAGATGACAAAGAGATTATTAAATATATTAAAGAGTTGGAGGACAAAAATGTAGAAATTTCAACATTTAAGCAGGAACTAGAAACAACGAAAAAAACATATGAAGTAAAATGCTCACAGTTGGAAGCAAAAGTTGAGGATGCTAAAGAGGAATTGAAACATAAATCACAAGAATATGAACATTTGTTGGAAAAACTAAGAAATGAGGTTAAAGAGAATGAAGTCATTTCTGAGTCAAAGTATCAAAAGTGGATCATGAAAGAGAACGAGATACGAAAAGCTGTGAATTTTCAATTTAGTTCCATACAGAAATTGAAACTGTCATGGGAATCCATTAAGCAAGATGCTATGAAAGAGCAAAAGATTTATTCTGAGGAATGTAATCTATTAGGTATAAATCTTAAATCACTAGTAGATGCAGCTGAGAGTTATCAAATAGTTCTTGCAGAAAATCGAAAATTGTTCAATGAAGTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTCGACTTAGACCATTTCTTCCTGGACAAAAGGAAAAACAATCTATTGTGGAACACATTGGTGAAACAGACTTGGTTGTGGCAAATCCCGCCAAACAAGGAAAAGAAGCACTTAGAACATTTAAGTTCAACAAGGTCTTTGGCCCAACCTCAACTCAAGCTGAGGTGTATGCTGACATACAAGCCTTTATACGATCAGTACTTGATGGGTTTAATGTATGTATATTTGCTTATGGCCAGACTGGTTCAGGGAAAACTTACACAATGAGTGGTCCAAATGGTGCAACAACTGAGAGTCTTGGTGTTAACTATCGAGCTCTTAATGACCTCTTTAGCATATCCACAAGTAGAAAAGGCTCCATAGAGTATGACATTGGGGTTCAAATAATTGAGATATATAATGAACAAGTGCGTGACTTGTTATCAACTGATGCTTCTTCAAAAAAACTTGGGATATTAAGTCACTCTCAACCAAATGGATTAGCAGTACCTGATGCTACAATGCAACCTGTGAAATCAACTTCAGATGTCATTAAGCTAATGGACATTGGCCTAAAAAATAGAGCCAAGGGTTCCACTGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTCTCAATTCATGTTCATGGGAAGGATAAGAAGTCTGGTTCTTCTCTTCAAGGTAATCTTCATTTGGTAGATTTGGCAGGAAGTGAAAGGGTAGATCGCTCTGAAGTAACTGGGGATAGACTTAAGGAAGCACAACATATTAACAAATCATTATCTGCCCTTGGAGATGTCATTTTTGCTCTTGCTCAAAAAACCTCCCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTGCAATCATCTCTTGGTGGTCAGGCCAAGACACTCATGTTAGTCCAAATTAATTCAGATTTAAAGTCTTTTTCTGAATCTCTAAGTACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAGTTAGGTGCTGCTAAAAGTACCAAAGATGGTAGAGACGTCAGAGAATTAATGGAGCAGGTGTCTTCCCTTAAGGACACTATTTTGGTTAAAGACAAGGAGATTGAGAAGCTACAATTACTTAAGGATCTGAAAAATGTTTATCCTAGTGTCAATTCTGAGAATCCTGAAACTACCTCTGAATGA 2670 0.3577 MNPPSNNHTIEPRDLGNSSANFNGINSLQSKVSSEAKFQHILHSPVMTEPSTTLISQVGHKFPEVFRLRQGSYGDLPSAKISELMKSTSLDNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQAAHLKTQNNLFKAREEKYHSRIKILEALTFGTKEESEVGRTKKEDKKMENDKDVIRYTKDIEDKNMEISTLKQELETMRKTYEVQLSQLEAKAEAEKKVDDKEIIKYVKELEDKNMEVLTLKKNLETMKKTYEIQCSQLEAKTEKEKMADDKGVIKYIKELEDKNVEILAFKQELETLKKTYEVKCSQLEAKVNEKENVDDKEIIKYIKELEDKNVEISTFKQELETTKKTYEVKCSQLEAKVEDAKEELKHKSQEYEHLLEKLRNEVKENEVISESKYQKWIMKENEIRKAVNFQFSSIQKLKLSWESIKQDAMKEQKIYSEECNLLGINLKSLVDAAESYQIVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHIGETDLVVANPAKQGKEALRTFKFNKVFGPTSTQAEVYADIQAFIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNGATTESLGVNYRALNDLFSISTSRKGSIEYDIGVQIIEIYNEQVRDLLSTDASSKKLGILSHSQPNGLAVPDATMQPVKSTSDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVHGKDKKSGSSLQGNLHLVDLAGSERVDRSEVTGDRLKEAQHINKSLSALGDVIFALAQKTSHVPYRNSKLTQLLQSSLGGQAKTLMLVQINSDLKSFSESLSTLKFAERVSGVELGAAKSTKDGRDVRELMEQVSSLKDTILVKDKEIEKLQLLKDLKNVYPSVNSENPETTSE* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1514 889 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 350 870 - -
Gso9g1514 889 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 26 189 - -
Gso9g1514 889 Coils Coil 300 338 - -
Gso9g1514 889 Gene3D - 239 279 - -
Gso9g1514 889 Gene3D - 338 379 - -
Gso9g1514 889 Gene3D - 289 329 - -
Gso9g1514 889 Gene3D - 187 229 - -
Gso9g1514 889 PANTHER KINESIN-LIKE PROTEIN KLP-3 350 870 - -
Gso9g1514 889 PANTHER KINESIN-LIKE PROTEIN KLP-3 26 189 - -
Gso9g1514 889 ProSiteProfiles Kinesin motor domain profile. 501 828 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1514 889 Gene3D Kinesin motor domain 442 830 IPR036961 -
Gso9g1514 889 Pfam Kinesin motor domain 507 826 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1514 889 MobiDBLite consensus disorder prediction 1 22 - -
Gso9g1514 889 SMART kinesin_4 499 836 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1514 889 Coils Coil 350 413 - -
Gso9g1514 889 PRINTS Kinesin heavy chain signature 575 596 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1514 889 PRINTS Kinesin heavy chain signature 698 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1514 889 PRINTS Kinesin heavy chain signature 729 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1514 889 PRINTS Kinesin heavy chain signature 778 799 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso9g1514 889 Coils Coil 193 238 - -
Gso9g1514 889 Coils Coil 247 281 - -
Gso9g1514 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 501 866 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1514 Gso-Chr9 39402886 39408120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1514 189 828 Calmodulin-binding Proteins AT5G65930 29.848 4.98e-65 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1514 K10406 - gmx:100779403 1651.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1992 5 43021941 43030859 Gso9g1514 9 39402886 39408120 PCT
Gso8g0347 8 3282919 3290153 Gso9g1514 9 39402886 39408120 PCT
Gso9g1514 9 39402886 39408120 Gso5g1992 5 43021941 43030859 PCT
Gso9g1514 9 39402886 39408120 Gso8g0347 8 3282919 3290153 PCT