Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1504 ATGAGACTAGCCATGTCTACTCCTTCAAAGAGCATAATCTGTTCAAGGGAAGATGATTATGAACTTAGAAGAGGGCCATGGAGTGTTGAAGAGGATGATCTTCTCATCAGTTACATTGCCAATAATGGGGAAGGGAGATGGAATTTGCTTGCTATACGTTCAGGATTAAGGAGAACAGGTAAGAGTTGTAGATTGAGATGGCTAAATTATCTAAAGCCAAATGTTAAGAGAGGAAATTTAACCTCGGAAGAGCAGCTTTTGATTTTTGAACTCCACTCAAAGTGGGGCAACAGGTGGTCAAAAATTGCGCATCAGCTGCCGGGCAGAACAGACAATGAAATAAAGAACTATTGGAGAACAAGGATTCAGAAACGAGCAAAATATCTGAAATTTGAGGCACACAGAAAATCAAGATTTGTAGAATTTGTCAAGGGTCTACAGATGACAAGATATCTTCATAAAGCACAAGAATCATCTCCTTCAGCCATGTCAATCCAAGACCAAGCAATTCCTTTACCTTTTGATGGTGTTACTATTCCTCATTATTCATCATTTGGGATTGGGACAACACCAACAACACAAATCACTTGCCAGGGAGGTCTCAATCATTTGAATCAGCAAGACCAAAACTCAGAATCTGAACACAACAATGGTTCATGCATTTCCTCTTCAGAATCAGCAAATATCCCATATATGAGTCAGCCTTTGGGACACACTACTAGTCAATTTCAGGCCTTAGATAACTGTGACTTTGGCATCTGTTCATATGATGGCTATAGCATAGATAACAATTCCTATGACATGGATGCCTTGAACTTGACAACCACAATGGTTGCTGAGAATCTGGAACTGCCAGTGTTTGATGTCCAAATATCAGAACCCTATTTTATGAACATGGATGAATTGTGGCAATTTAGGAACATACAAAGATGA 933 0.3934 MRLAMSTPSKSIICSREDDYELRRGPWSVEEDDLLISYIANNGEGRWNLLAIRSGLRRTGKSCRLRWLNYLKPNVKRGNLTSEEQLLIFELHSKWGNRWSKIAHQLPGRTDNEIKNYWRTRIQKRAKYLKFEAHRKSRFVEFVKGLQMTRYLHKAQESSPSAMSIQDQAIPLPFDGVTIPHYSSFGIGTTPTTQITCQGGLNHLNQQDQNSESEHNNGSCISSSESANIPYMSQPLGHTTSQFQALDNCDFGICSYDGYSIDNNSYDMDALNLTTTMVAENLELPVFDVQISEPYFMNMDELWQFRNIQR* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1504 310 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 6 306 - -
Gso9g1504 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 71 IPR017930 -
Gso9g1504 310 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Gso9g1504 310 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Gso9g1504 310 Gene3D - 79 141 - -
Gso9g1504 310 CDD SANT 81 120 IPR001005 -
Gso9g1504 310 SUPERFAMILY Homeodomain-like 21 118 IPR009057 -
Gso9g1504 310 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Gso9g1504 310 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Gso9g1504 310 Gene3D - 21 77 - -
Gso9g1504 310 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Gso9g1504 310 CDD SANT 26 71 IPR001005 -
Gso9g1504 310 MobiDBLite consensus disorder prediction 202 224 - -
Gso9g1504 310 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 6 306 IPR044676 GO:0003700|GO:0006355|GO:0043565
Gso9g1504 310 SMART sant 76 124 IPR001005 -
Gso9g1504 310 SMART sant 23 73 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1504 Gso-Chr9 39298903 39300616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1504 19 164 MYB Transcription Factor Family AT1G68320 62.329 9.14e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso9g1504 Myb_DNA-binding 1.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1504 K09422 - gmx:100778425 642.884