Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1503 ATGTACACATCAAGGAAGAAAATCCACAAGGATAAGGATGCTGAGCCAACTGAATTTGAGGAATCAGTCGGACAGGCATTGTTTGATCTGGAAAATACCAACAATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAACTCAGCTGTCCAAATTGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGATTCCGGAAGATTCATGTCAGGCTTGTGAGAGAACTTGAGAAAAAGTTTAGTGGAAAGGATGTAATCCTGATTGCCACCCGGAGGATATTGAGGCCACCAAAGAAAGGTTCTGCTGTTCAGCGTCCCCGCACCCGAACACTCACTGCTGTACACGAGGCAATGCTGGAAGATATTGTATTGCCTGCTGAGATTGTTGGAAAGCGTGTTAGGTATAAAATTGATGGTTCCAAGATTATGAAGGTCTTTTTGGACCCCAAGGAGCGAAACAACACCGAGTACAAATTGGAGACTTTTGCTGCAGTATACAGGAAACTTTCGGGCAAAGATATTGTGTTTGAGTATCCTACCACCGAGGCTTAG 576 0.4358 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILIATRRILRPPKKGSAVQRPRTRTLTAVHEAMLEDIVLPAEIVGKRVRYKIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKLSGKDIVFEYPTTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1503 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso9g1503 191 Coils Coil 27 47 - -
Gso9g1503 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Gso9g1503 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso9g1503 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1503 Gso-Chr9 39294045 39296494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1503 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.534 4.30e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1503 K02993 - gmx:100499757 375.555