Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1496 ATGTCTGCCAAAAGGTTTTTCAATGATTCTGATCAAGACCCTGAGAATCCTGGCGGAAAACGGATGAGGAATACTAGACCTTCTTTTGCTTCGGTTATAGGAGAAGTGGTTATGGTGAAAAACTTGGAGAACCTTTTCTCAGCCATGGAACCTTTGCTTAAAAGAGTGGTTGGAGAAGAAGTTGACCAAGCTATGAGACAATGGTCACGCTCCTTTGCTAGGTCTCCTTCACTGAGGCTCCAAGCAATGGATCAGCAACAACCTTCAACTTTGCAACTATGTTTCAGCAAAAGGCTTTCCCTTCCAATCTTCACAGGTAGCAGAATTCTTGATGTTGATGGGAACCCCATCAACATAGTTCTAATGGACAAAAGCAATGGCCAAGGAGTCCCCACAAGTCTCTCAAATGCCATCAAGCTAGAGATTGTGGTTGTTGATGGAGACTTTCCTCTTAATGACAATGATGAGGATTGGACTAGTGAGGAATTCAATAGGCACATAGTGAAGGAGAGAAATGGGAAGCGACCATTGCTTGCAGGAGAATTGAATGTGATCATGCGTGATGGAATTGCACCAACCGGAGACATTGAGTTCACTGATAATTCCAGCTGGATTCGCTGCCGGAAGTTCCGAGTTGCGGTGAGGGTGGTACCGGGGACTAATCCAGGCGGTGTTCGGATTCGTGAAGCCATGACTGAGGCGTTTGTTGTTAAGGATCACCGTGGAGAATTGTACAAAAAACACCACCCTCCAATGCTTCATGACGAAGTTTGGCGCCTAGAGAAGATAGGTAAAGATGGAGCTTTCCACAGAAAATTGTCATCAGAGGGGATCAAAACAGTGCAAGACTTTCTCAAACTAGCAGTCATTGATGCTCTTAAGCTAAGAAATATTTTAGGCATGGGGATGTCAGACAAAATGTGGGAAGTCACTATCAAGCATGCAATGACCTGTGACATCGGGAGCAAGATGTACATTTATCGTGGACCAGAGTTTACTATTTTTCTGGATCCAGTGTGCAAATTAATAAGAGCAGATGTCAATGGGCATACATTTTCCAACAGGGATCCGATGAGCCATTTGAATAAGGCCTATATAGACAAATTGGTGAAAGAAGCATATGCTAGATGGAGTAACTTGGAGGAGATTGACGAAGTTCTGAATGATAACATTGCTTTGTTAACCCAAGGTGATCAAACTGTGGAACAATTTGCAAACAATCAACCTGCAGCTGCCTCAGTAGAAACAACATATGATCAGAATCAGTATTACAGTGACAAATCAGGCAGCTATGTAGCAAACAACAATACACAAATGGGATGCTGCGAGTGGTCACTGAATCAAGCCTATAGCCCAGCACCGTTTGCCAATGGCTTTCCTTTTAGTTTCTCAGTGAGACAATCGGATGGTGACATAACCGCTTCAGGTTCTAGCTCTGTGGATGTTGATGGAGCCACAAGGCATAATTAA 1470 0.4361 MSAKRFFNDSDQDPENPGGKRMRNTRPSFASVIGEVVMVKNLENLFSAMEPLLKRVVGEEVDQAMRQWSRSFARSPSLRLQAMDQQQPSTLQLCFSKRLSLPIFTGSRILDVDGNPINIVLMDKSNGQGVPTSLSNAIKLEIVVVDGDFPLNDNDEDWTSEEFNRHIVKERNGKRPLLAGELNVIMRDGIAPTGDIEFTDNSSWIRCRKFRVAVRVVPGTNPGGVRIREAMTEAFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHRKLSSEGIKTVQDFLKLAVIDALKLRNILGMGMSDKMWEVTIKHAMTCDIGSKMYIYRGPEFTIFLDPVCKLIRADVNGHTFSNRDPMSHLNKAYIDKLVKEAYARWSNLEEIDEVLNDNIALLTQGDQTVEQFANNQPAAASVETTYDQNQYYSDKSGSYVANNNTQMGCCEWSLNQAYSPAPFANGFPFSFSVRQSDGDITASGSSSVDVDGATRHN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1496 489 Pfam Calmodulin binding protein-like N-terminal domain 91 240 IPR046831 -
Gso9g1496 489 PANTHER OS02G0177800 PROTEIN 1 480 IPR012416 GO:0005516
Gso9g1496 489 PANTHER PROTEIN, PUTATIVE-RELATED 1 480 - -
Gso9g1496 489 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
Gso9g1496 489 Pfam Calmodulin binding protein C-terminal domain 323 383 IPR046829 -
Gso9g1496 489 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1496 Gso-Chr9 39197455 39202752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1496 3 384 Calmodulin-binding Proteins AT5G57580 48.082 6.98e-115 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1496 - - gmx:100803213 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0806 7 8875595 8882224 Gso9g1496 9 39197455 39202752 GST