Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1494 ATGGCTCTTCCTCTTCTTCCACCTCTTTCTTCAATCATCAACACCCTTTTCTTCTTTACACTCTTCTTCCCAAAATATGTTTCGAGTGATGTTGAAGGGTACTCAGCATGTGAACCTTTTAGCTGTGGTGAAATCGACATTCGCTACCCATTTTGGAGTAGTGATCACCAACAAAGTTATTGTGGGCATCCAAAGTTCAAGCTTGATTGCCAACAAGACAACGTGACAATTGACATGATGTCGCAGAGATTCCATGTTATTGATATTGATCAAACATCTAAGGTTTTGAAGATGGCAAGGTTGGATTTATGGGATGACCCTTGTACTGATGAGTATAGCAATGTCAAGTTGGATTCTGATTTCTTCAACTACAATTCCAATGATGATGACTATACTTTGTTATATGATTGTGGTCCTCCTGTTACATATACGTCTAGTGTGAATATTAAAGGAACAATATCATTTAGTTGCCCCATAGATGGTGGTTTTCGAGATGCATTCTTTGTGTCAAGTACTGATGTGGGTAATTTGAAGGATCTGGGGTGCAAGCATAGCATCAATGTTTCTGTTCTAAGAGAGGCTGTGAAGGATGCTTTGCAAGTGGAAAATGTTTTAGAAAAAGGATTTGAGGTAGGGTGGATTGGTGTGGATGAAGGACAATGTGATGGTTGCATAAAATCTGGTGGGAGATGTGGACACAACGTATCTAAGGATGCATTTACGTGCCTCTGTCCTAATCAGCAATCTTATGATGAGGTTTGTAGCAAAAGCCAAACAAGTTCTCCCTTAGCAGCACCAACGCCTAAACCAACACCAGAACAGGCACTGTCACCCCCTTTTGGTCCAAAATTTCAAGAAAAGTCTCCACATGCTCCGAATCCGCGGAAGTTGAGACTCATTATAGGTCTTGCAAGTGCACTAATGGGAGGATTCATGATATGCATCATAATTTGCTGTACTAAATCTAAGTCATCCACACAAGTAAAATTCTCGTTTACGATAAAGAATGGCCAAGATATAGAATCATTCTTAAAAAACCATGGAGCTCTATCACAGAAGAGATACAAATTTTCAGAAGTTAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGTGAAGGTGGTTTTGGTGCAGTATACAAAGGAGAGCTACTCAGTGGTGTTCCTGTGGCCGTAAAGATATTGAATGAATCCAAAGGAAATGGTGAAGACTTCATCAATGAGGTTGCTAGCATCATTAGAACTTCTCATGTCAATGTTGTCACACTTGTTGGATTCTGTTTGGAAGGACGCAAGAAAGCTCTCATTTATGAGTTTATGCCCAATGGTTCCCTTGACAAGTTTGTATACAAAAAGGGTCTCGAAACCACTTCATCCTTGAGTTGGGATAATTTCTGGCAAATTGCCATAGGTATAGCCCGAGGACTAGAGTACTTGCATAGGGGTTGCAACACTCGAATTTTACATTTTGACATAAAGCCACATAACATTCTTTTGGATGAGAATTTCTGCCCTAAGATATCAGATTTTGGGCTTGCAAAGCTTTGTCCTAGGAAAGAGAGCATTATTTCCATGTCAGACCCTAGAGGAACAATAGGATATGTAGCTCCAGAAGTATGGAATAGAAATTTTGGCGGAGTTTCACACAAATCTGATGTTTACAGCTACGGAATGATGCTACTAGAAATGGTGGGAGGGAGAAAGAATATTAATGCGGAAGCAAGTCACACAAGTGAGATATACTTCCCACATTGGATCTACAACAGGCTAGAGCAGGGTGGAGATTTGAGACCTAATGAGGTGATGGCAACGGAAGAAAATGAGATAGTAAAGAGAATGACTGTAGTGGGCTTATGGTGCGTTCAAACCTTTCCAAAGGATAGACCTACTATGACTAGAGTAGTAGATATGCTAGAAGGCAAAATGAATTCCCTGGAAATCCCCCCAAAACCTGTTCTTTCTTCTCCCACTAGGTCAGTGTCAGAATCTCCCACAAGATGA 2001 0.4038 MALPLLPPLSSIINTLFFFTLFFPKYVSSDVEGYSACEPFSCGEIDIRYPFWSSDHQQSYCGHPKFKLDCQQDNVTIDMMSQRFHVIDIDQTSKVLKMARLDLWDDPCTDEYSNVKLDSDFFNYNSNDDDYTLLYDCGPPVTYTSSVNIKGTISFSCPIDGGFRDAFFVSSTDVGNLKDLGCKHSINVSVLREAVKDALQVENVLEKGFEVGWIGVDEGQCDGCIKSGGRCGHNVSKDAFTCLCPNQQSYDEVCSKSQTSSPLAAPTPKPTPEQALSPPFGPKFQEKSPHAPNPRKLRLIIGLASALMGGFMICIIICCTKSKSSTQVKFSFTIKNGQDIESFLKNHGALSQKRYKFSEVKKMTNSFKVKLGEGGFGAVYKGELLSGVPVAVKILNESKGNGEDFINEVASIIRTSHVNVVTLVGFCLEGRKKALIYEFMPNGSLDKFVYKKGLETTSSLSWDNFWQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESIISMSDPRGTIGYVAPEVWNRNFGGVSHKSDVYSYGMMLLEMVGGRKNINAEASHTSEIYFPHWIYNRLEQGGDLRPNEVMATEENEIVKRMTVVGLWCVQTFPKDRPTMTRVVDMLEGKMNSLEIPPKPVLSSPTRSVSESPTR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1494 666 MobiDBLite consensus disorder prediction 646 666 - -
Gso9g1494 666 SUPERFAMILY Protein kinase-like (PK-like) 350 639 IPR011009 -
Gso9g1494 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Gso9g1494 666 PANTHER - 28 662 - -
Gso9g1494 666 Pfam Wall-associated receptor kinase C-terminal 181 246 IPR032872 -
Gso9g1494 666 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 662 IPR045874 GO:0004672
Gso9g1494 666 ProSiteProfiles Protein kinase domain profile. 365 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1494 666 MobiDBLite consensus disorder prediction 261 292 - -
Gso9g1494 666 Pfam Wall-associated receptor kinase galacturonan-binding 37 99 IPR025287 GO:0030247
Gso9g1494 666 Pfam Protein tyrosine and serine/threonine kinase 367 638 IPR001245 GO:0004672|GO:0006468
Gso9g1494 666 SMART serkin_6 365 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1494 666 Gene3D Phosphorylase Kinase; domain 1 328 439 - -
Gso9g1494 666 ProSitePatterns Protein kinases ATP-binding region signature. 371 393 IPR017441 GO:0005524
Gso9g1494 666 Gene3D Transferase(Phosphotransferase) domain 1 440 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1494 Gso-Chr9 39142356 39160005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1494 10 651 Receptor kinase-like Gene Family AT5G38260 38.520 4.37e-153 455
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso9g1494 PK_Tyr_Ser-Thr 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1494 - - gmx:102665158 1342.02