Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1489 ATGGCTCTTCCTCTTCTTCCACCTCTTTCTTCAATCATCAACACCCTTTTCTTCTTTACACTCTTCTTCCCAAAATATGTATGGAGTGATGTTGAAGGGTACTCAGCATGTGAACCTTTTAGCTGTGGTGAAATCGACAACATTCGCTACCCATTTTGGAGTAGTGATCATCAACAAAGTTATTGTGGGCATCCAAAGTTCAAGCTTGATTGCCAACAAGACAACGTGACAATTGACATGATGTCGCAGAGATTCCATGTTATTGATATTGATCAAACATCTAAGGTTTTGAAGATGGCAAGGTTGGATTTATGGGATGACCCTTGTACTAATGAGTATAGCAATGTCAAGTTGGATTCTGATTTCTTCAACTACACTTCCAATGATGATGACTATACTTTGTTATATGATTGTGGTCCTCCTGTTACATATACGTCTAGTGTGAATATTAAAGGAACAATATCATTTAGTTGCCCCATAGATAGTGGTTTTCGAGATGCATTCTTTGTGTCAAGTACTGATGTGGGTAATTTGAAGGATCTGGGGTGCAAGCATAGCATCAATGTTTCTGTTCTAAGAGAGGCTGTGAAGGATGCTTTGCAAGTGGAAAATGTTTTAGAAAAAGGATTTGAGGTAGGGTGGATTGGTGTGGATGAAGGACAATGTGATGGTTGCATAAAATCTGGTGGGAGATGTGGACACAACGTATCTAAGGATGCATTTACGTGCCTCTGTCCTAATCAGCAATCTTATGATGAGGTTTGTAGCAAAAGCCAAACAAGTTCTCCCTTAGCAGCACCAACGCCTAAACCAACACCAGAACAGGAACTGTCACCCCCTTTTGGTCCAAAATTTCAAGAAAAGTCTCCACATGCTCCGAATCCGCGGAAGTTGAGACTCATTATAGGTGTTGTTTCTGGTGTGGTGGGAGCACTTGGTATGGGCATTATCGGCTTTCTCTGTTATCGTAGAAAGAAGAATCGTTATGCAATCTCATATATACAATCTCGTAGCCTCTCTTCTGATCCATCTTCAAAAGACACTGAGAAGGGAGTTCAAAGCTTTACTCAAAGCTTTGTACCAGGAGTGCCCCTCTTCTTGTATGATGAACTTGAAGAGGCCACAAATTACTTTGACTCATCTAAAGAACTAGGAGAAGGGGGATTTGGAACTGTGTATTTTGGCAAACTGCGGGACGGGCGTTCTGTTGCAGTGAAGAGGTTGTATGAGAACAACTTCAAGAGAGTTGCACAGTTCATGAATGAAATTAAAATCCTAGCAAAGTTAGTTCATCCAAATCTTGTGAAGTTATATGGATGCACCTCTCGCCACAGCCGCGAACTTCTGCTTGTATACGAGTACATTCCTAATGGAACCGTTGCTGATCATCTTCATGGTCAACGATCCAAACCTGGAAAACTCCCTTGGCATATTAGAATGAAAATTGCTGTGGAGACTGCAAGTGCATTGAATTTTCTTCATCACAAAGACGTCATCCACCGAGATGTGAAAACCAACAATATTCTTCTTGACAGTGACTTTTGTGTCAAAGTGGCAGATTTTGGACTCTCGCGTCTTTTCCCAGACCATGTCACCCATGTTTCAACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCCGAGTACCACCAGTGCTACCAGCTTACTAAACAAAGCGACGTATATAGCTTTGGAGTGGTTCTGGTTGAGCTGATATCATCCTTGCCTGCTGTAGATATCACAAGGCATAGACATGAAATCAATTTGTCCAACATGGCCATCAACAAGATTCATAATCAGGCACTGCATGAGCTTGTCGACCCTACCCTCGGGTTTGAATCCGATTTCAAAGTCAGGAAAATGATAAATGCTGTGGCTGAGTTAGCATTTCAGTGCTTGCAGAGTTCTAAAGAGATGAGACCTTCTATGGAAGAAGTGGTGGAGACTCTCAAGGATATACAGAGTGATGGCAAACATAAAAGCCAGCCTGAGGTAATGGACATCACAAGCACAGCTGATGATGTTGTGTTGCTCAAGGATGACCCTCCTCCACCATCACCTGATTCTAATGCGGTGAGCAAGTCGACAACGCCAAATGCTAGCGGATAA 2109 0.4239 MALPLLPPLSSIINTLFFFTLFFPKYVWSDVEGYSACEPFSCGEIDNIRYPFWSSDHQQSYCGHPKFKLDCQQDNVTIDMMSQRFHVIDIDQTSKVLKMARLDLWDDPCTNEYSNVKLDSDFFNYTSNDDDYTLLYDCGPPVTYTSSVNIKGTISFSCPIDSGFRDAFFVSSTDVGNLKDLGCKHSINVSVLREAVKDALQVENVLEKGFEVGWIGVDEGQCDGCIKSGGRCGHNVSKDAFTCLCPNQQSYDEVCSKSQTSSPLAAPTPKPTPEQELSPPFGPKFQEKSPHAPNPRKLRLIIGVVSGVVGALGMGIIGFLCYRRKKNRYAISYIQSRSLSSDPSSKDTEKGVQSFTQSFVPGVPLFLYDELEEATNYFDSSKELGEGGFGTVYFGKLRDGRSVAVKRLYENNFKRVAQFMNEIKILAKLVHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGQRSKPGKLPWHIRMKIAVETASALNFLHHKDVIHRDVKTNNILLDSDFCVKVADFGLSRLFPDHVTHVSTAPQGTPGYVDPEYHQCYQLTKQSDVYSFGVVLVELISSLPAVDITRHRHEINLSNMAINKIHNQALHELVDPTLGFESDFKVRKMINAVAELAFQCLQSSKEMRPSMEEVVETLKDIQSDGKHKSQPEVMDITSTADDVVLLKDDPPPPSPDSNAVSKSTTPNASG* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1489 702 Gene3D Transferase(Phosphotransferase) domain 1 455 667 - -
Gso9g1489 702 Gene3D Phosphorylase Kinase; domain 1 350 454 - -
Gso9g1489 702 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 12 692 - -
Gso9g1489 702 SMART serkin_6 378 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1489 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 498 510 IPR008271 GO:0004672|GO:0006468
Gso9g1489 702 CDD STKc_IRAK 384 653 - -
Gso9g1489 702 Pfam Protein tyrosine and serine/threonine kinase 381 650 IPR001245 GO:0004672|GO:0006468
Gso9g1489 702 SUPERFAMILY Protein kinase-like (PK-like) 360 667 IPR011009 -
Gso9g1489 702 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 692 IPR044652 -
Gso9g1489 702 ProSiteProfiles Protein kinase domain profile. 378 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1489 702 ProSitePatterns Protein kinases ATP-binding region signature. 384 406 IPR017441 GO:0005524
Gso9g1489 702 MobiDBLite consensus disorder prediction 654 702 - -
Gso9g1489 702 Pfam Wall-associated receptor kinase C-terminal 182 247 IPR032872 -
Gso9g1489 702 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Gso9g1489 702 MobiDBLite consensus disorder prediction 260 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1489 Gso-Chr9 39101850 39112482 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1489 297 702 Receptor kinase-like Gene Family AT1G25390 55.875 9.07e-145 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso9g1489 PK_Tyr_Ser-Thr 1.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1489 - - gmx:100800873 1177.16