Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1488 ATGTTGCAACAGTTTATCAATGAAACTGTTATCCTAAACTACTTGCCTCACAAAAATATCGTGTCAATTTATGGGTGTGCTTCTCATCACAAGGAATCACTACTGGTGCATGAATACCTATCCAATGGAAATCTTTCTGCTCATCTTCAAAGTGAAATAGCCGAAAACAGCACACAACCTTGGTTGACCAGATTAGATATAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTATTATGGCATCATCCACCGTAATGTGAAGTCCAGCAATATTCTCCTAGATGTGAACTTTTGTGCTAAACTTGCTAACCTTCATTTATCTCAGAAACTTCCAGATGGAGTTCCTGTCTATGCCACCCATGTTACTGGTGATATAATTGGGACATGTGGTTATATGGACTCAGAGTTGGCATATGGCCGGCTTAGTGTTAAAAATGGTGTTTATAGCTTTGGGGTGGTATTGTGTGAGCTTCTATCATTGACGCTGGCAAAATGCTGGGTTCTGAATGAAGAGGATAATCTTGCTACCCTTTTAAGCAGAAAAATTGAAAACCAAGCTTTGGTGGAGTTGTTGGATCCAAGACTTGGCTTCGATACAAACCTTAAGATCAAGTGGATGATGACTGCTATAACTGAGCTTGCACTTCTATGCATGAAATGCCCACAAGAACTAAGGCCTAATATGGAACAGGTGCTAGAGACACTCGATGGCATAAAGCAAGGAAGACATGAAACAAACTCAATAAAAGGTATAATAAAATGA 768 0.3932 MLQQFINETVILNYLPHKNIVSIYGCASHHKESLLVHEYLSNGNLSAHLQSEIAENSTQPWLTRLDIAIDIANALDYLHYYGIIHRNVKSSNILLDVNFCAKLANLHLSQKLPDGVPVYATHVTGDIIGTCGYMDSELAYGRLSVKNGVYSFGVVLCELLSLTLAKCWVLNEEDNLATLLSRKIENQALVELLDPRLGFDTNLKIKWMMTAITELALLCMKCPQELRPNMEQVLETLDGIKQGRHETNSIKGIIK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1488 255 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1488 255 Pfam Protein tyrosine and serine/threonine kinase 3 237 IPR001245 GO:0004672|GO:0006468
Gso9g1488 255 SUPERFAMILY Protein kinase-like (PK-like) 2 237 IPR011009 -
Gso9g1488 255 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
Gso9g1488 255 PANTHER TYROSINE KINASE FAMILY PROTEIN 2 252 - -
Gso9g1488 255 PIRSF ILK 1 253 - -
Gso9g1488 255 Gene3D Transferase(Phosphotransferase) domain 1 44 252 - -
Gso9g1488 255 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 252 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1488 Gso-Chr9 39094022 39094789 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1488 2 241 Receptor kinase-like Gene Family AT1G25390 45.783 5.01e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso9g1488 PK_Tyr_Ser-Thr 2.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1488 - - gsj:114368478 515.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0819 7 9085252 9089680 Gso9g1488 9 39094022 39094789 GST