Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1487 ATGAGATTGAGGCGTGATATCTTTGTGTGCTGTTTCACTAGCACATCTTCAGACACAATGCAAAAGGAAAAGCACAGAAAACTTGAGGATGGACGTGAGATTACAATTCAGCGCTTTAACGGAGACCAGCGCTACTTATTACAACAGTTTATCAATGAAACTATTATCCTAAATTACTTGCCTCACAAAAATATTGTGTCAATTTACGGGTGTGCTTCTCATCATGAGGAATCTCTGCTAGTGACAGAATACCTATCCAATGGCAATCTTGCTGCTCATCTTCATAGTGAAAAGGACGAAAAGATTACACTACCTTGGCTTAAACGATTGGATATAGCATTTGATATTGCAAATGCATTGAACCATCTTCACAATTATGGCATCATCCACCGCAATGTGAAGTCCAGTAATATTTTCCTAGATGCGAACTTTTGTGCAAAAGTTGGTAACCTTCTTTTGTCGCAGAAACTTCCAGATGGAGTTCCGGTGCATGCGACCCATGTTACTGGTGATAGGGCAGGGTCAAGTGGTTATATGGACCCAGAGTATTTGACAAAAGGCCAACTTAGCGTAAAAAATGATGTTTATAGCTTTGGGGTGGTTTTGTGTGAGCTTCTATCATCGACGCTGGCAAAAGACTGGTTTCTGAATGAAGAGGATAATATTGCTACCGTTTTAAGCAAAAAAATGGAAAACCAAGCTTTGGTGGAGCTGTTGGATCGAAGACTTGGCTTCGACTCAAACCTTAAGATCAAGCAGGTAATGACTGCTACAGCTGAGCTTGCATTTATGTGCATGAAATGTCCACAAGAATTAAGGCCAAACACGGAACAGGTGCTAGAGATTCTCAATGGCATAAAGCCAGGGAGAATTGAAACAGGCTCTTACTCAACAAAAGATATCTCAGCTTTGAAAATCTTCCACAATGCTGAACTTGAAGAAGCTACTAACAATTTTGACAATTTCCTTGGAAAGGGAGGGTATGGAAGCGTGTACTATGGGAAACTTAAAGATGGGCGAGAGGTTGCAGTAAAATGTTTCCATGAAGAGAACGAGACAGAAGAGACCATTAAGCAATTCATGAAAGAAACTGACATCTTAGGTCTCTTGCACCATCAAAATCTGGTTTCACTTTATGGCCGCACTTCTCGCAATTGCGACAAACCCATGCTAGTTTACGAGTACATCTCCAATGGCACTCTTACTAAACATCTTCATGAATCTTCCCATGGTAAACTACCATGGCATACTAGATTGAATATTGCCATTGAAACTGCAGCTGCCTTGGTATTTCTTCATGACTCAGCTATCATCCACCGTGACGTAAAAGGGAGTAACATTCTGTTGGATGAAAATTTTACTGTCAAAGTTGCAGATTTTGGATTCTCACGGTCTCTTCCAGATCATGCTACTCATGTTTCAACTATTCCAGTAGGAACACGTGCTTACATAGATCCTGACTACTATGAATCTGGAAGAGTTAGTGACAAAAGTGATGTCTATAGTTTTGGGGTGGTCTTGTTCGAACTCATATCATCCATTCGCCCAAGTTCATTGGAAGGCACAGATGATGATACTCTCGCACAGTATGCAAAGAGAAAAATCTTAAACAATCAATTAAACGAGGTAGTGGATCCAAGTTTTCGGTTTGGTTCTGATAAAAACATAATGGAAATGATAACAGCAGTAGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAAGGAATTCAGGCCATCCATGAAACAGCTGCTACAGACCCTTCAGGGCATTAGGGAAGGAACATGGGGATTCAACCAGATAACATAG 1809 0.4074 MRLRRDIFVCCFTSTSSDTMQKEKHRKLEDGREITIQRFNGDQRYLLQQFINETIILNYLPHKNIVSIYGCASHHEESLLVTEYLSNGNLAAHLHSEKDEKITLPWLKRLDIAFDIANALNHLHNYGIIHRNVKSSNIFLDANFCAKVGNLLLSQKLPDGVPVHATHVTGDRAGSSGYMDPEYLTKGQLSVKNDVYSFGVVLCELLSSTLAKDWFLNEEDNIATVLSKKMENQALVELLDRRLGFDSNLKIKQVMTATAELAFMCMKCPQELRPNTEQVLEILNGIKPGRIETGSYSTKDISALKIFHNAELEEATNNFDNFLGKGGYGSVYYGKLKDGREVAVKCFHEENETEETIKQFMKETDILGLLHHQNLVSLYGRTSRNCDKPMLVYEYISNGTLTKHLHESSHGKLPWHTRLNIAIETAAALVFLHDSAIIHRDVKGSNILLDENFTVKVADFGFSRSLPDHATHVSTIPVGTRAYIDPDYYESGRVSDKSDVYSFGVVLFELISSIRPSSLEGTDDDTLAQYAKRKILNNQLNEVVDPSFRFGSDKNIMEMITAVAELAFQCVQCPKEFRPSMKQLLQTLQGIREGTWGFNQIT* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1487 602 Gene3D Phosphorylase Kinase; domain 1 12 84 - -
Gso9g1487 602 Gene3D Transferase(Phosphotransferase) domain 1 396 596 - -
Gso9g1487 602 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1487 602 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 27 602 IPR044652 -
Gso9g1487 602 Pfam Protein tyrosine and serine/threonine kinase 320 588 IPR001245 GO:0004672|GO:0006468
Gso9g1487 602 Pfam Protein tyrosine and serine/threonine kinase 35 282 IPR001245 GO:0004672|GO:0006468
Gso9g1487 602 SUPERFAMILY Protein kinase-like (PK-like) 299 592 IPR011009 -
Gso9g1487 602 SUPERFAMILY Protein kinase-like (PK-like) 29 284 IPR011009 -
Gso9g1487 602 PANTHER TYROSINE KINASE FAMILY PROTEIN 27 602 - -
Gso9g1487 602 SMART serkin_6 20 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1487 602 SMART serkin_6 317 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1487 602 Gene3D Phosphorylase Kinase; domain 1 292 395 - -
Gso9g1487 602 ProSiteProfiles Protein kinase domain profile. 317 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1487 602 Gene3D Transferase(Phosphotransferase) domain 1 85 291 - -
Gso9g1487 602 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Gso9g1487 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1487 Gso-Chr9 39083936 39087995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1487 304 592 Receptor kinase-like Gene Family AT1G25390 51.864 1.57e-89 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso9g1487 PK_Tyr_Ser-Thr 4.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1487 - - gmx:100776297 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0821 7 9108857 9112271 Gso9g1487 9 39083936 39087995 GST