Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1480 ATGCCTGTTGTGACAGAACACATGAAATGGAGAAGACCAAGAAACCAATTTAGGAACCCCATTTCAGAAACCGATGATCCAATCACTCAAATCCCTTCCATAATCCAATCCTCTCACAGCAAATCCACCATCTCCTCTCTCTTGTCTTCTTTCTCCACCTCCGGTGAAACCACACATGCCAGAGACCAAAACAGAACCAACAACAACAACAAAAGCAACAGAAAATTCTCTGCAGCAACCTTCAGGGGCTTCGGCTGCACTGCCGGTTCATCGCAGAAGGTGTCGGTGCCGGCGGTGATTCGCTCCTCAGCAGATTGGGAAGGGAAGAGGAACAGAAAGAAGAATCACAGAAGGAAGAGTAACAGTAACGGTAACAGTGGCAACAACACATGTGATGATGATGATGTTTCTGGTGGAACATTTGTGGATTTTCAGGATGTTTCGTGTGGCCCTGGAATTGGATTCTCAACTGATGCTGCATCTGTGGAATGTGCTGTGGCTAGGAAGAATGTGTCTTCAAGAGGAAAACTTGATGTGGTGGAAGAGAGGGTAACACACAGGGAGATAATGATAATTCGAGGAAGAATAATGATGGGGGGACGATTTAATTCACACGACCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCATACGAGCAATTGCTTGAACTGGGTGAGAGAATCGGTTATGTCAACACTGGGCTCAAAGAAGATGAGATGGGACTCAACATAAGGAAAGTTAAGCCTTCAAGTTCAAATGATACATCAAAGCATCAACTAGACAAAAAGTGCAGTGTTTGTCAGGAGGAGTATGAATCAGATGATGAGCTGGGGAGATTGAAGTGTGACCACAGCTATCATTTTCAGTGTATAAAACATTGGCTTGAGCATAAAAATTTCTGCCCAGTTTGTAAGCAAGAAGTTGTGGTTCGACACTAA 945 0.4381 MPVVTEHMKWRRPRNQFRNPISETDDPITQIPSIIQSSHSKSTISSLLSSFSTSGETTHARDQNRTNNNNKSNRKFSAATFRGFGCTAGSSQKVSVPAVIRSSADWEGKRNRKKNHRRKSNSNGNSGNNTCDDDDVSGGTFVDFQDVSCGPGIGFSTDAASVECAVARKNVSSRGKLDVVEERVTHREIMIIRGRIMMGGRFNSHDQFRDWRLDVDNMSYEQLLELGERIGYVNTGLKEDEMGLNIRKVKPSSSNDTSKHQLDKKCSVCQEEYESDDELGRLKCDHSYHFQCIKHWLEHKNFCPVCKQEVVVRH* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1480 314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 313 IPR013083 -
Gso9g1480 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 3 188 IPR045191 GO:0061630
Gso9g1480 314 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 187 314 IPR045191 GO:0061630
Gso9g1480 314 Pfam Ring finger domain 265 307 IPR001841 -
Gso9g1480 314 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 3 188 - -
Gso9g1480 314 PANTHER C3HC4-TYPE RING ZINC FINGER PROTEIN 187 314 - -
Gso9g1480 314 MobiDBLite consensus disorder prediction 97 131 - -
Gso9g1480 314 SUPERFAMILY RING/U-box 265 312 - -
Gso9g1480 314 MobiDBLite consensus disorder prediction 46 75 - -
Gso9g1480 314 ProSiteProfiles Zinc finger RING-type profile. 266 307 IPR001841 -
Gso9g1480 314 MobiDBLite consensus disorder prediction 1 27 - -
Gso9g1480 314 SMART ring_2 266 306 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1480 Gso-Chr9 38988264 38993714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1480 188 311 C3H Transcription Factor Family AT2G15530 46.825 1.26e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1480 - - gmx:100818517 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0833 7 9269681 9275246 Gso9g1480 9 38988264 38993714 GST