Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1478 ATGGATCCTCCACCCCTCTCTGCCACCACTCAAAAAAACCATCCTGACTCAGTAGAGTCTTTCTCTCCACGTTCCCGAAACTCGGAAACGTGGAATGATGAGACTCTACCGGCCGTTCCTGGCGCTAAGCTGCGCCTCATGTGCAGCTACGGTGGCCACATCATGCCACGCCCTCACGACAAGTCTCTCTGCTATGTCGGCGGTGACACGAGGATCGTCGTTGTGGACCGCCATTCGTCGTTGAAAGACTTGTGTGCAAGGCTTTCCCGAACCATTCTCAATGGAAGACCCTTCACACTCAAGTACCAGCTTCCCAATGAAGACCTTGATAGCCTAATCACTGTTACCACTGACGAAGACCTTGACAACATGGTGGAAGAGTATGATCGTATAATGGCAAAAGGTTCGGCTTCTTCGCGGCTCAGGTTGTTCTTGTTCTTCACCAAACCTGAGGCCACAGTTTCAATGGGGTCACTCCTTGATGATTCCAAGTCAGAGACATGGTTTGTTGATGCACTTAACAACTCTGGCATGATATCAAGAGTGGTGTCAGATTCTGCTGCAGGGGATTCCTTTGTTAACCTTGATGGTGTTGGTGTTGGTGTTGGTGTTGGTGTTAGTGCTAGTGGTTCAAGCAACAACTTGGAGGCTTTGCCTGATGCTAACAACTGCAAGGTTAAGAATTTGCCTGAAGTGGTGCAAGTGCAATCAACACCTGGTTCACCTATGATGGAGAACAACAGTTCTTCTTCTCCTTCTTTCTCTCCTTCTCTAGCTAATCTACCTCCGATTCGGGTTCGTGTTGATGACAATGGTAGTAGGCTTCATCAAGAGAACAAGGTCGGGATGGTGGTGGAGGAGCAGTTTGCTCAGATGACAATTGCAAGTGGGGTGAAGCCAGATGATGGATTGGTGAATGTTGTTTCTTCTACAGTGCCTGTGCCTGTAATTCCTGCAGCTGTGACCATGGCATCAGTTGGGGTGATTACTACTAGTGATAATGTGATGAATAGAGTTGTTTATGAGGATGAGAGGTCAGATCCTGGGTTTCGGAAGCCCCCTTTGCCAATGCAGCTTGTGCAGCCTAGGACTAGTGGTGGCGTGGGTTTGCCTTCTCCTGATTCAGTAGCAAGTGATAGTAGTATTGCATCTGCAAATTCTTTCTCCAAGACTGTTTACTACCAAGATCAAGTCCAAGCCACACTACTAGACAACAAAGTTGTTGCTGCTATGCCAAATGCAAAGAGTGAAATATCTGATCAGATGATTCAGGTCCAAGGACAACTTCAAGATTCTGGCTACACATTACCCCCACAATTGGATCAAACCAAGCAACAATTCCAGCAGCAGCAGCCATTGATCCATGCCAACAATCACTACATCCACCACCCTGCAGCCACAGGTCCAGTGCCAGTTTCATCATACTACCCAGTTTATGCCCCACCACCACAACTACAACAACTTCACCCTCATATAAGTCAACAACAGTACCCAGTTTATGTGATGCCTGTTGGACCTACACAAGTAACACAACCCTACAACATGGCATTGCAGCACAATATTTCTGACCCTAATGTGGTAGCTTCAAGCAGGCCATTAATGCCACAAAGTGTTGTTACCTCAGCAGCATACAAAGATGGTACTCCACCTATTTACTCCACCAAGTCACTTAGCCCAACTATGGCTCCATCAAATCCTGGATATGCTCCAATACCTACCAACCAATTTCAGCCACAGTATGTGGGTTTGTCTCAGTTCCACCATCAACCACAGTCCATTGCTGTGGCTCCCTCTAGTACTACTACTACTACTACTAATTATGGCTATGAATATGGTGGCCATTTGCAAGATCAAGCTTACTACACTCAACAACAAACCACTAATGCTACATTGCTTCCTCAGTACCAATCCATGACCCCAGCTGCAGCTGCTGCAGCACTATCAGATGCTTCAAAACAGTTTCCTGCAGACAACATTCAGCAGCCAAATAGAGCATCACAACCAGTATGA 2010 0.4682 MDPPPLSATTQKNHPDSVESFSPRSRNSETWNDETLPAVPGAKLRLMCSYGGHIMPRPHDKSLCYVGGDTRIVVVDRHSSLKDLCARLSRTILNGRPFTLKYQLPNEDLDSLITVTTDEDLDNMVEEYDRIMAKGSASSRLRLFLFFTKPEATVSMGSLLDDSKSETWFVDALNNSGMISRVVSDSAAGDSFVNLDGVGVGVGVGVSASGSSNNLEALPDANNCKVKNLPEVVQVQSTPGSPMMENNSSSSPSFSPSLANLPPIRVRVDDNGSRLHQENKVGMVVEEQFAQMTIASGVKPDDGLVNVVSSTVPVPVIPAAVTMASVGVITTSDNVMNRVVYEDERSDPGFRKPPLPMQLVQPRTSGGVGLPSPDSVASDSSIASANSFSKTVYYQDQVQATLLDNKVVAAMPNAKSEISDQMIQVQGQLQDSGYTLPPQLDQTKQQFQQQQPLIHANNHYIHHPAATGPVPVSSYYPVYAPPPQLQQLHPHISQQQYPVYVMPVGPTQVTQPYNMALQHNISDPNVVASSRPLMPQSVVTSAAYKDGTPPIYSTKSLSPTMAPSNPGYAPIPTNQFQPQYVGLSQFHHQPQSIAVAPSSTTTTTTNYGYEYGGHLQDQAYYTQQQTTNATLLPQYQSMTPAAAAAALSDASKQFPADNIQQPNRASQPV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1478 669 MobiDBLite consensus disorder prediction 1 35 - -
Gso9g1478 669 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 662 - -
Gso9g1478 669 Pfam PB1 domain 59 146 IPR000270 GO:0005515
Gso9g1478 669 PANTHER OS05G0427100 PROTEIN-RELATED 1 662 - -
Gso9g1478 669 SUPERFAMILY CAD & PB1 domains 59 156 - -
Gso9g1478 669 MobiDBLite consensus disorder prediction 238 261 - -
Gso9g1478 669 MobiDBLite consensus disorder prediction 644 669 - -
Gso9g1478 669 ProSiteProfiles PB1 domain profile. 43 148 IPR000270 GO:0005515
Gso9g1478 669 MobiDBLite consensus disorder prediction 238 258 - -
Gso9g1478 669 CDD PB1_UP2 47 146 - -
Gso9g1478 669 Gene3D - 63 147 - -
Gso9g1478 669 MobiDBLite consensus disorder prediction 653 669 - -
Gso9g1478 669 SMART PB1_new 58 148 IPR000270 GO:0005515
Gso9g1478 669 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1478 Gso-Chr9 38973665 38976553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1478 42 209 MAP Kinase Kinase Kinase AT1G79570 37.778 4.67e-27 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1478 - - gmx:100797907 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0835 7 9288609 9291362 Gso9g1478 9 38973665 38976553 GST