Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1471 ATGAGCGAAAGCACAGAGACCCAGAAGCGCCAAGCTGCTGATTCAGAGAGCAAGGAGAATGCTGTTGCTTCCAAGAAACCAAAGGTCGAATCTTGTGGAACGGGTACCGATGGTAATGCCGTAAAGAAACCATCTTTCCTCATTGAAGCTGATGCAGCTGAAGATAAGGGCGCCAGGCACACCATGGAGGATGCGTCCGTCATGCTTCTTGACGCAAGTTTAGATTACCCTGGAAATTTGAGATGTGCACACTTTGCTATTTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATCGGAATGTTCTTTCAGCAGGATTACCACGTGAGTTGTTTGATGCAAAGGAAGCTAGACGAGCTATTTTGAATGGTTTCCTTAAAACTGATGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAAAGAGTTGTGGTTGCAAATTTAGGAGATGCCAAGGCAGTATTAGCTCGGTCAACTGATGGATCCCAAAACCACCCAGATGGTGTCCAGACACAGCTGAAGGCCATTGTTTTGACTAGAGAACACAAACCTATCTTCCCACTGGAGCGTGCACGCATTGAGAAGGCAGGTGGTTTTGTGTGCCCAGATGGACGATTACTAGCACGTCTAGAAATTTCTAGGGCTTTTGGAGATCGCCAATTCAAAAAGGTGGGTGTTGTTGCAACCCCAGATATATATAATTTTGAAGTTAATAATACAGAGCATTTCATCATTCTTGGCTGTGATGGTTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTACCTGTTGCCACAGTGAGCCGTCGTCTTGTAAGGGAGGCTGTTCGTGAGCGTCGCTGTAAAGATAACTGCTCTGCCATTATCATTGTATTCAAGCACAATTAA 978 0.456 MSESTETQKRQAADSESKENAVASKKPKVESCGTGTDGNAVKKPSFLIEADAAEDKGARHTMEDASVMLLDASLDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHRNVLSAGLPRELFDAKEARRAILNGFLKTDESLLQESAEGGWQDGATAVCVWVLGQRVVVANLGDAKAVLARSTDGSQNHPDGVQTQLKAIVLTREHKPIFPLERARIEKAGGFVCPDGRLLARLEISRAFGDRQFKKVGVVATPDIYNFEVNNTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVATVSRRLVREAVRERRCKDNCSAIIIVFKHN* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1471 325 SUPERFAMILY PP2C-like 46 323 IPR036457 -
Gso9g1471 325 PANTHER PROTEIN PHOSPHATASE 2C 8 319 IPR015655 GO:0004722|GO:0006470
Gso9g1471 325 CDD PP2Cc 53 322 IPR001932 -
Gso9g1471 325 Pfam Protein phosphatase 2C 52 310 IPR001932 -
Gso9g1471 325 MobiDBLite consensus disorder prediction 9 25 - -
Gso9g1471 325 ProSiteProfiles PPM-type phosphatase domain profile. 49 322 IPR001932 -
Gso9g1471 325 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 8 319 - -
Gso9g1471 325 MobiDBLite consensus disorder prediction 1 39 - -
Gso9g1471 325 SMART PP2C_4 38 320 IPR001932 -
Gso9g1471 325 Gene3D - 36 325 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1471 Gso-Chr9 38848165 38853146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1471 10 274 PP2C-type Phosphatase Gene Family AT1G18030 62.807 1.87e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1471 K17500 - gmx:100815852 646.351