Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1470 ATGGCTAGTGTTGTGACAAAGAAAGTGAAGCTTCTTGTGGCATTGCTTACCCTGCAGTTGTGCTTTGCAGGATATCACATCGTGTCTAGACTTGCACTAAATATTGGTGTCAGCCAAGTCGTTTACCCAGTTTACCGAAATTTGATTGCCGTGCTTTTGTTGAGCCCATTTGCTTATGTGTTAGAGAAGAATCAAAGACCACCCCTCACTTTATCTTTACTGGCTCAGTTCTTCCTACTTGCATTGCTGGGGATCACTGCAAACCAAGGGTTTTACTTGTTGGGATTATACTATGCTTCTCCAACTTTTGCTTCTGCCTTGCAAAACTCGGTTCCTGCGATCACTTTTGTCTTGGCCTTAGCTTTAAGGCTTGAGGAAGTCAACATCAGAAGGAGACATGGATTGGCAAAAGTTCTAGGAACCATTGCCAGTGTGGGGGGTGCCTCAGTAATAACTCTTTACAAAGGTCCTCCTCTTCTTCACCTGCAGATGGACCAAATACAAGGAGACACTTTAGAAGTAGATCAGTCAACAAAAGTGCAAAATTGGACTTGGGGTTGCATATACTTGCTTGGACATTGTCTATCATGGGCTGGCTGGATAGTTTTTCAGGCTCCAGTGGTGAAGAAGTATCCAGCAAAACTAACCCTCACCTCTTTTACATGCTTCTTTGGATTGATCCAATTCTTGATCATAGCAGCCTTTGCAGAAAATGACTTGGAAAATTGGAAGATACAATCACTAGAGGAGCTTTTTATCATTCTATATGCTGGAATTATAGCATCTGGTGTTGTCATATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTGTTTGTTGCTGTCTTCCAGCCAGTGCAAACTATTCTAGTTGCTGTCATGGCAGCCCTAATTCTTGGTGATCAGCTATACCCTGGAGGGCTTATTGGTGCAGTTCTCATTGTGCTTGGTCTATACTTGGTCCTTTGGGGCAAAACCAATGAAAAAAAAGTGACTGAGCCATCACTAACAAACCCCTTGCTTAAGGCAGAAGAAGAGAATAAAGAAACTGTTGCAGTTCCAAAAGACATACCATGA 1080 0.4269 MASVVTKKVKLLVALLTLQLCFAGYHIVSRLALNIGVSQVVYPVYRNLIAVLLLSPFAYVLEKNQRPPLTLSLLAQFFLLALLGITANQGFYLLGLYYASPTFASALQNSVPAITFVLALALRLEEVNIRRRHGLAKVLGTIASVGGASVITLYKGPPLLHLQMDQIQGDTLEVDQSTKVQNWTWGCIYLLGHCLSWAGWIVFQAPVVKKYPAKLTLTSFTCFFGLIQFLIIAAFAENDLENWKIQSLEELFIILYAGIIASGVVISLQTWCIQKGGPVFVAVFQPVQTILVAVMAALILGDQLYPGGLIGAVLIVLGLYLVLWGKTNEKKVTEPSLTNPLLKAEEENKETVAVPKDIP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1470 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 327 - -
Gso9g1470 359 PANTHER WAT1-RELATED PROTEIN 8 340 - -
Gso9g1470 359 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Gso9g1470 359 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Gso9g1470 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 151 - -
Gso9g1470 359 PANTHER WAT1-RELATED PROTEIN 8 340 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1470 Gso-Chr9 38843294 38845722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1470 4 351 Nodulin-like Gene Family AT3G18200 67.887 2.44e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1470 - - gmx:100795244 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0844 7 9536277 9548798 Gso9g1470 9 38843294 38845722 GST