Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1455 ATGGATCGTAACAAAAAGGGTGCACCGGTGGTAGAGTTTTTTACTGAGTATGGAGAGGCAAGTAGGTTTGAAATCCACGAAGTGATTGGAAAAGGGAGCTACGGTGTTGTGTGTTCTGCTGTTGACACTCAAACTAGGGAAAAAGTTGCAATTAAGAAAATCAATGATGTTTTTGAGCATGTGTCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGTTTGCTCCAACATCCTGATATAGTTGAAATTAAGCATATAATGCTTCCTCCCTCACGACGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAGTCTGACCTTCATCAAGTAATTAAGTCAAATGATGATCTTACCCCCGAGCACTACCAATTTTTCTTGTACCAACTTCTTCGAGGCCTCAAATTTATACATACAGCAAATGTGTTTCATCGTGACTTGAAGCCAAAAAATATTCTAGCTAATGCTAATTGCAAACTAAAAATATGTGATTTCGGACTTGCTCGAGTTTCATTTAATGAGGCCCCATCTGCTATATTCTGGACCGACTATGTTGCAACTCGGTGGTATCGTGCACCTGAACTTTGTGGTTCTTTTTTCTCAAAATATACGCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCAGTGGGAAGCCATTGTTTCCTGGAAAAAATGTAGTGCACCAATTGGATCTCATAACTGACCTTCTTGGTACTCCTCCTGCTGAAACCATTTCTAGGATTCGGAATGAGAAGGCTAGAAGATACCTTGCTAGCATGCAGAAAAAGCAACCTATTCCATTCTCCAAAAAATTTCCAAATGCAGATCCATTGGGTCTTAATTTGCTGGAGCGATTACTTGCATTTGATCCTAAAGATCGTCCAGCAGCTGAAGAGGCACTAAGAGATCCTTATTTCCATGGTTTGTCAAATGTGGACCGTGAACCGTCGTCCACTCAGCCCATTTCAAAGCTTGAATTTGAGTTTGAGAGGAGAAAGTTGGCCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTAGAGTATCATCCTCAGATGCTCGAAGAATATCTTCGTGGTGGAGAACAAACAAGCTTCATGTATCCAAGTGGGGTTGACCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCATTGTTGAGGCAGCACGCCTCCTTACCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAAAATAATCAAAACAATGATGTTGAAAATCCAACTGGAGCAAATCATCAGAGTCCTCCAGGGTCTGATGTGACAAATTCTGGAAATCCAGATGCACAAAATGAACCCTCCAGGCCAAACTGCAGCGCACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAGTGTATAGATGTGAAACAAAGTAAAGTTTCAGAGGAGGAGCCACTTACAGGGGTCAACGATGAGCTGGATGAGTTGACACAGAAGGTTGCTTCCCTCCATGCTTAG 1536 0.4232 MDRNKKGAPVVEFFTEYGEASRFEIHEVIGKGSYGVVCSAVDTQTREKVAIKKINDVFEHVSDATRILREIKLLRLLQHPDIVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKSNDDLTPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANANCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLITDLLGTPPAETISRIRNEKARRYLASMQKKQPIPFSKKFPNADPLGLNLLERLLAFDPKDRPAAEEALRDPYFHGLSNVDREPSSTQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMLEEYLRGGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLLRQHASLPRERVPAPKDENNQNNDVENPTGANHQSPPGSDVTNSGNPDAQNEPSRPNCSARSLLKSASISGSKCIDVKQSKVSEEEPLTGVNDELDELTQKVASLHA* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1455 511 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1455 511 MobiDBLite consensus disorder prediction 413 467 - -
Gso9g1455 511 SUPERFAMILY Protein kinase-like (PK-like) 18 319 IPR011009 -
Gso9g1455 511 MobiDBLite consensus disorder prediction 478 497 - -
Gso9g1455 511 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Gso9g1455 511 MobiDBLite consensus disorder prediction 422 467 - -
Gso9g1455 511 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso9g1455 511 SMART serkin_6 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1455 511 Gene3D Phosphorylase Kinase; domain 1 38 361 - -
Gso9g1455 511 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 454 - -
Gso9g1455 511 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 454 - -
Gso9g1455 511 Gene3D Transferase(Phosphotransferase) domain 1 109 338 - -
Gso9g1455 511 CDD STKc_TDY_MAPK 22 360 - -
Gso9g1455 511 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1455 Gso-Chr9 38620504 38626941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1455 11 511 MAP Kinase Gene Family AT3G18040 79.842 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso9g1455 Pkinase 1.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1455 - - gmx:100787677 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0860 7 9786466 9792773 Gso9g1455 9 38620504 38626941 GST