LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso9g1451	ATGGAGGAATCAGATTCAACACCAAAGTCTCTGATGGAGAATCTGCTTGGCCTTTTGAGGGTTCGCGTGAAGCGTGGTGTCAACCTTGCCGTTCGTGATGTTCGAAGCAGCGACCCTTATGTTGTCATCAAGATGTACAACCAGACTGTGTATGACCATGACACTTTTAGCAAAGATGACAAAATGGGAGATGCAGAATTTGACATCTTTCCCTTTATAGAGGCCTTGAAGATGAACTTAACTGGCCTTCCAAATGGTACTGTAGTCACAAGAATACAACCAAGCAAGCATAATTGCCTGGCAGACGAGAGCTGCATAACTTATAGCAATGGCAAGGTTGTCCAAGATATGATCCTTAGATTGCAAAATGTGGAGTGTGGTGAAGTGGAAATCCAATTGCAGTGGATTGATCTTCCTGGTTCTAAGGGTTTATGA	435	0.4345	MEESDSTPKSLMENLLGLLRVRVKRGVNLAVRDVRSSDPYVVIKMYNQTVYDHDTFSKDDKMGDAEFDIFPFIEALKMNLTGLPNGTVVTRIQPSKHNCLADESCITYSNGKVVQDMILRLQNVECGEVEIQLQWIDLPGSKGL*	145

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso9g1451	144	PANTHER	PROTEIN C2-DOMAIN ABA-RELATED 4	49	143	IPR044562	-
	Gso9g1451	144	PANTHER	PROTEIN C2-DOMAIN ABA-RELATED 4	8	49	IPR044562	-
	Gso9g1451	144	PANTHER	CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN	8	49	-	-
	Gso9g1451	144	PANTHER	CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN	49	143	-	-
	Gso9g1451	144	Pfam	C2 domain	17	45	IPR000008	-
	Gso9g1451	144	Pfam	C2 domain	49	69	IPR000008	-
	Gso9g1451	144	SUPERFAMILY	C2 domain (Calcium/lipid-binding domain, CaLB)	13	137	IPR035892	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso9g1451	Gso-Chr9	38587325	38589198	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso9g1451	27	144	C2H2 Transcription Factor Family	AT1G70790	55.833	7.74e-42	134

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso9g1451	-		-	gmx:100810504	266.929

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g0865	7	9855389	9860267	Gso9g1451	9	38587325	38589198	GST
	Gso8g0456	8	4241023	4242334	Gso9g1451	9	38587325	38589198	PCT
	Gso9g1451	9	38587325	38589198	Gso8g0456	8	4241023	4242334	PCT