Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1429 ATGGAGAGGGAATTTTTTGGCTTGAGTTCCAAAAATGGTGCATGGACTACTATGAAAGATGATGCTGTCAACAAATCAAGAGACCAAGTGAGGAGTTCAGGAATGCAGTGGTCATTCCCAAACAAGGTCTCTGCCCTTCCTCAATTCCTGTCTTTCAAGACCAATCAGGAAGACAAGCCTAGAAAGACTATTCTTGAGCCACTAGCTTCATCTGGATATATGGCCATGTCAACTCAATATGCTTTTGACTCTAACCAAAAATCATTCTTGGGTTTGACCAACAGAAATTTGTCCATAAGCAAGCATGCTGCAGGGAACAAACAAGGAATGACAGTTTATCCTCTACAATGTTGTGATGCACAGTCAGAGGAAGCAAGAATATTTTCAGTGTCCAACCAATCAAATCAAGTGAGTCCTGTTCTTCAATCTAATCTTGCCTCTACCGGACTGAACATGGTCAATTCAGTCATAAAACCACAACCTTTTGGTTCCAAATCCTCTGGCACACCTCTATCTATTCTTCCATCAATAGGTTCCATTGTTGGATCTACTGACTTAAGGAATTATTCCAAAAACTCCACCATGCCTACTCAGCTTACGATTTTCTATGCTGGTTCTGTGTGTGTTTATGATGACATTTCTCCTGAGAAGGCCAAGGCTATCATGTTAATGGCCGGAAATGGTTATACTCCAACTGAGAAAATGGAACTTCCCACGGTGAAATTACAGCCAGCAATTTCTATTCCCTCCAAAGATGATGGTTTCATGATAAGCCAATCCTATCCACCCTCAACCTTTCCCACCCCTCTCCCATTGACCTCTCATGTCAATTCTCAGCCAGGAGGAGGATCTTCTAGCAACAAAGAAATTTCAATAATAAGACAAGTAGGACCTTCAACTGCTCCTACTAACCATTTGGGATCACCCATTATTGGTTCTATAGGATCTGCATCTAAAGAAAAGGCTCAGCCAGTTTGCTTGCCTCAGGCACGTAAAGCATCCTTGGCTCGGTTTTTGGAGAAGAGAAAGGGAAGGATGATGAGAACATCGCCATACTTATATATGAGCAAGAAATCACCTGAATGCAGCTCTTCTGGATCAGACAGTGTCAGTTTCTCCTTGAACTTCTCTGGATCCTGTTCACTACCAGCCACCAACTAG 1161 0.4238 MEREFFGLSSKNGAWTTMKDDAVNKSRDQVRSSGMQWSFPNKVSALPQFLSFKTNQEDKPRKTILEPLASSGYMAMSTQYAFDSNQKSFLGLTNRNLSISKHAAGNKQGMTVYPLQCCDAQSEEARIFSVSNQSNQVSPVLQSNLASTGLNMVNSVIKPQPFGSKSSGTPLSILPSIGSIVGSTDLRNYSKNSTMPTQLTIFYAGSVCVYDDISPEKAKAIMLMAGNGYTPTEKMELPTVKLQPAISIPSKDDGFMISQSYPPSTFPTPLPLTSHVNSQPGGGSSSNKEISIIRQVGPSTAPTNHLGSPIIGSIGSASKEKAQPVCLPQARKASLARFLEKRKGRMMRTSPYLYMSKKSPECSSSGSDSVSFSLNFSGSCSLPATN* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1429 386 Pfam Jas motif 328 352 IPR018467 -
Gso9g1429 386 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 262 386 IPR040390 -
Gso9g1429 386 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 35 263 IPR040390 -
Gso9g1429 386 Pfam tify domain 196 226 IPR010399 -
Gso9g1429 386 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 262 386 - -
Gso9g1429 386 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 35 263 - -
Gso9g1429 386 SMART tify_2 192 227 IPR010399 -
Gso9g1429 386 ProSiteProfiles Tify domain profile. 192 227 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1429 Gso-Chr9 38363282 38369817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1429 35 370 Tify Gene Family AT3G17860 38.529 7.58e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso9g1429 tify 1.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1429 K13464 - gmx:100807288 699.123