Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1427 ATGAGTGAGTATCATCTTGTCACAATTCTGAAACCAAAACACAAAACAACAATGCAACAACATTCTCATACACTCTTCACTACCATCACCATAATCCTCTTCTCATTCTTCTTCCCTCTAACATTTTCTGACCTCTCATCGGAGCGCGCGGCGCTGCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACCCTCCTCTGGAACGCCACCGCCGCCTCGCCCTGCGCCTGGCCCGGCGTCCAATGCGACGCTGCCAACGCTACCGTGGTCGAGCTCCACCTCCCCGCCGTTGCACTCTCCGGCGAGCTCCCAGCCAACGTGTTCCCGGCGCTCAAGAACCTCCACACCCTCAGCCTCCGCTTCAACTCCCTCTCCGGCACCCTCCCCGCCGACCTCGCCGCCTGCGCCGCCCTCCGCAACCTCTTCCTCCAACAGAACCACTTCTCCGGCGAGGTTCCGGCGTTCCTCTCCGCCATGACCGGCCTCATCCGCCTCAATTTGGCCTCCAACAACTTCTCCGGTCCAATTCCGGTCCGGTTTGGGAACCTCACCCGGTTGAGGACCCTTTTCCTTGAGAACAACCGGTTCAACGGTTCGCTTCCAAATTTTGAAGAACTCAATGAATTGGCTCAGTTCAATGTCTCATACAACATGTTAAACGGTTCTGTGCCTAAAAAGTTGCAAACTTTTGGTGAAGATTCGTTTTTAGGGAATACCCTTTGTGGGAAACCTCTAGCAATTTGTCCTTGGGACGACGGGGGTGGTGAGAGTGGTGCAAATGGGAATTCAAATTCAAGTGGGGTTGGAGGGGGTGAAGGGAGTGTGATTGGAGGGGAGAAGAATAAGAAGGGGAAGCTTTCTGGGGGTGCAATTGCTGGTATTGTTGTTGGGAGTGTGGTGGTTCTTTTGTTGGTTGTGTTTGCTTTGATTCTCTTGTGTAGAAGTGGGAACAAGACTAGGAGTGTTGATAATGTTAATAACATTGTGGGGTTGAAGGAGGAGCAGCATCAGCATCAGCATCAGCATGGGGAGGTGGGAATTGAGAGTGGCAATGTGGAGAATGGTGGTGGTGGGGGAGGTGGGAATTTGGTGGCTGCAGCAGTGGCGGCGGTGAGTGGCGGCAGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGAGGAGGAGGAGGAGGAGATAAGAAGTTGGTGTTTTATGGTAATAAGGTGAAGGTGTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTGTTAGGGAAAGGGACTTTTGGGACTACCTATAAGGCGGTTATGGAGGATGGGCCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGACTGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGGGGTGGGAATGATGGATCATGAGAATTTGGTGCCTCTCAGGGCTTACTACTATAGCAGGGATGAGAAGCTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGGAAACAAAGGAGCTGGTAGGACACCACTGAATTGGGAAATGAGATCAAGCATTGCACTAGGAGCTGCTTGCGGCATCCAGTACCTGCATTCACAAGGGCCAAGTGTTTCTCATGGAAACATAAAATCCTCCAACATCCTCCTAACCAAGTCCTATGATGCCAGGGTGTCTGATTTCGGCCTCACACACCTTGTTGGCCCTTCATCCACGCCTAACAGGGTTGCTGGCTATCGTGCTCCCGAAGTAATCGATCCGCGCAAAGTGTCTCAGAAGGCTGATGTATACAGTTTCGGAGTGTTGCTCTTGGAGCTTCTCACAGGAAAGGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTGCAATCAGTTGTTAGAGAAGAGTGGAGTTCTGAGGTGTTTGATATTGAACTCCTTAGGTATCAGAATTCTGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTTGTTCCATACCCTGATAACCGTCCTTCAATGTCTCAAGTGATTCAACGCATACAAGAGTTACGTAGGCCTAGCATGAAAGAGGCTACTCAAGACCAAATCCAACAACTTGATTTGATCAATGATATAGATGATGCGTCTTCTAGATGA 2127 0.5101 MSEYHLVTILKPKHKTTMQQHSHTLFTTITIILFSFFFPLTFSDLSSERAALLALRSAVRGRTLLWNATAASPCAWPGVQCDAANATVVELHLPAVALSGELPANVFPALKNLHTLSLRFNSLSGTLPADLAACAALRNLFLQQNHFSGEVPAFLSAMTGLIRLNLASNNFSGPIPVRFGNLTRLRTLFLENNRFNGSLPNFEELNELAQFNVSYNMLNGSVPKKLQTFGEDSFLGNTLCGKPLAICPWDDGGGESGANGNSNSSGVGGGEGSVIGGEKNKKGKLSGGAIAGIVVGSVVVLLLVVFALILLCRSGNKTRSVDNVNNIVGLKEEQHQHQHQHGEVGIESGNVENGGGGGGGNLVAAAVAAVSGGSGGGGGGGGGGGGGGGGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVMEDGPVVAVKRLKDVTVSEKEFKEKIDGVGMMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSSIALGAACGIQYLHSQGPSVSHGNIKSSNILLTKSYDARVSDFGLTHLVGPSSTPNRVAGYRAPEVIDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSMSQVIQRIQELRRPSMKEATQDQIQQLDLINDIDDASSR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1427 708 CDD STKc_IRAK 417 680 - -
Gso9g1427 708 ProSitePatterns Protein kinases ATP-binding region signature. 417 439 IPR017441 GO:0005524
Gso9g1427 708 PANTHER OS05G0588300 PROTEIN 18 708 - -
Gso9g1427 708 Pfam Leucine rich repeat N-terminal domain 46 82 IPR013210 -
Gso9g1427 708 SUPERFAMILY Protein kinase-like (PK-like) 415 677 IPR011009 -
Gso9g1427 708 Gene3D Phosphorylase Kinase; domain 1 391 485 - -
Gso9g1427 708 Pfam Protein kinase domain 414 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1427 708 SUPERFAMILY L domain-like 66 226 - -
Gso9g1427 708 ProSiteProfiles Protein kinase domain profile. 411 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1427 708 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 18 708 - -
Gso9g1427 708 Gene3D Ribonuclease Inhibitor 45 228 IPR032675 -
Gso9g1427 708 Gene3D Transferase(Phosphotransferase) domain 1 486 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1427 Gso-Chr9 38334336 38337548 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1427 44 697 Receptor kinase-like Gene Family AT1G48480 56.753 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso9g1427 Pkinase 1.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1427 - - gsj:114425465 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0878 7 10019317 10022526 Gso9g1427 9 38334336 38337548 GST
Gso5g2107 5 44005957 44008642 Gso9g1427 9 38334336 38337548 PCT
Gso8g0468 8 4318309 4321298 Gso9g1427 9 38334336 38337548 PCT
Gso9g1427 9 38334336 38337548 Gso5g2107 5 44005957 44008642 PCT
Gso9g1427 9 38334336 38337548 Gso8g0468 8 4318309 4321298 PCT