Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1423 ATGCCTTGCAAACCCCGCTGCATCTACTGCACAATCTACATATTTATATTCATTTTCATGCTTTGCTTCTTCCTCTTCTTGATAATAATCAACCCTTCAAGTGTCAAGTTCTACGTAACTGAGGCCACCCTCACACAATTCAACCTCACAAGCAACAACACCTTGTATTACAACTTCAAGGTCAACATCACAGTGACAAACCCCAACAAGCACGTGATAGTGTACTATAGGATGATCAAAGCAATAGCTTGGTACAAAGATAATGAGTTTGATAGGGTGAGCTTAACACCCTTTGACCAAGGCTACAAGAATACCACCTTTCTTCGAGCAGTGTTTGTAGGGCAAAGTGTGATTATGCTCAAACCTAAACAACTTGGTGAGTACAAAGATGAGACAAGTATTGGGATTTACAATGACTTGGCTGTGAATTTTGATCTTAGAATTAGAGCCAAGTTTGGAAGAATTAAGAGCAGGCGTTTCAGTCCACCCTTTGTTCAGTGTCGCCGTTTGAGTGTTCCTTTGATTTTGATGGATGGTAAATCAGCACCTCCTAATTCTAGTGTCACCAGATGCAACACTGGTAATTTTTTCCAAGATCGGGATGGTTATTAA 612 0.4036 MPCKPRCIYCTIYIFIFIFMLCFFLFLIIINPSSVKFYVTEATLTQFNLTSNNTLYYNFKVNITVTNPNKHVIVYYRMIKAIAWYKDNEFDRVSLTPFDQGYKNTTFLRAVFVGQSVIMLKPKQLGEYKDETSIGIYNDLAVNFDLRIRAKFGRIKSRRFSPPFVQCRRLSVPLILMDGKSAPPNSSVTRCNTGNFFQDRDGY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1423 203 Pfam Late embryogenesis abundant protein 62 160 IPR004864 -
Gso9g1423 203 PANTHER OS05G0367900 PROTEIN 14 196 IPR044839 GO:0098542
Gso9g1423 203 PANTHER HARPIN-INDUCED 1 14 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1423 Gso-Chr9 38307296 38308063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1423 29 144 SNARE and Associated Proteins AT1G32270 32.773 2.62e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1423 - - gmx:100775381 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0883 7 10095051 10095404 Gso9g1423 9 38307296 38308063 GST