Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1419 ATGCAAGGGTCATTCATTCACTTCCTTTACTTCCAAAAGTGGGAGCATCTCAATCTCACTGACCTCATCATCTTCATCCACCACCATATATACTATAGGCATATATCAAAGGTTCACTTCTCCTGCTCAAAAATAGATATGGAATCTGAGAGGCCTAGCAGCACTATTAATGAGACCTACAAACAACAACAAGAACCAGAAGAAGAAGATGATGATGATTATCATAATGAAGAAGAAGAAGAAGAAGAAGAAGAAAACAATGAGATCCTCAAGAGAAGAATCTCCAACCACCCTCTCTATGGACTGCTGGTTGAAGCTCACTTGGACTGTTTGAAGGTTGGTGACATTTCCAACTTGGAGAGGGAGCTGAAGATAGATCAGATGCAAGCAACGGAGAAGCAAAACTTGGGCATGTTCAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGTTTGGCACTTGGCAAGCTTAAAGAAGCAATGGTGGAACCACAACAGAAGTCAATGGCTTTCATAAACAACATGCATTCACAACTTAGGGAGCTCACCAAGGCAACCTTGCCTGCACCGAATGCTGAACCAGCTGCAGCTACCACATCTTCTACTAGTGAGTGCAAATTCAGAAGAAAGCCAACAATTTAG 645 0.4217 MQGSFIHFLYFQKWEHLNLTDLIIFIHHHIYYRHISKVHFSCSKIDMESERPSSTINETYKQQQEPEEEDDDDYHNEEEEEEEEENNEILKRRISNHPLYGLLVEAHLDCLKVGDISNLERELKIDQMQATEKQNLGMFSQSELDLFMEAYCLALGKLKEAMVEPQQKSMAFINNMHSQLRELTKATLPAPNAEPAAATTSSTSECKFRRKPTI* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1419 214 Coils Coil 67 87 - -
Gso9g1419 214 MobiDBLite consensus disorder prediction 64 85 - -
Gso9g1419 214 Pfam KNOX1 domain 90 114 IPR005540 GO:0003677|GO:0005634
Gso9g1419 214 SMART KNOX2_2 134 185 IPR005541 GO:0003677|GO:0005634
Gso9g1419 214 Coils Coil 116 136 - -
Gso9g1419 214 Pfam KNOX2 domain 142 184 IPR005541 GO:0003677|GO:0005634
Gso9g1419 214 MobiDBLite consensus disorder prediction 194 214 - -
Gso9g1419 214 MobiDBLite consensus disorder prediction 51 88 - -
Gso9g1419 214 SMART KNOX1_2 88 134 IPR005540 GO:0003677|GO:0005634
Gso9g1419 214 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 75 181 - -
Gso9g1419 214 MobiDBLite consensus disorder prediction 189 214 - -
Gso9g1419 214 PANTHER FUSED COMPOUND LEAF 1 75 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1419 Gso-Chr9 38219513 38224154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1419 88 188 Homeobox Transcription Factor Family AT4G08150 34.579 3.43e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1419 - - gsj:114367439 359.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0891 7 10246909 10251045 Gso9g1419 9 38219513 38224154 GST