Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1416 ATGGCCCTCGTCCGCCACCGCCGCCACCCCAACCTCCGCCTCCCCCTCCCGGAGCCCTCCGAGCGCCGCCCCCGCTTCCCCCTTCCCCTCCCTCCCACCACCACCATCGCCAAACCCTCCGCCGGCGACACCATCGCCTCCGCCGACCTGGAGAAGCTCGCCGTCCTCGGCCACGGCAACGGCGGCACCGTCTACAAGGTCCGCCACAAGACCACCTCCGCCACCTACGCGCTGAAAATCATCCACTCCGACGCTGACGCCACCACGCGCCGCCGCGCCTTCTCGGAAACATCCATCCTCCGCCGCGCCACCGACTGTCCCCACGTCGTCCGCTTCCACGGCTCCTTCGAGAATCCCTCCGGCGACGTGGCGATCCTCATGGAGTACATGGACGGCGGCACCCTCGAGACCGCCCTCGCCACCGGCGGCACGTTCTCGGAAGAGCGACTCGCCAAGGTGGCGCGTGACGTTCTCGAGGGGCTCGCGTACCTCCACGCGCGCAACATCGCGCACCGCGACATAAAGCCCGCCAACATCCTAGTAAACTCCGAAGGAGAAGTTAAGATTGCAGACTTCGGAGTTAGCAAACTCATGTGCCGCACGCTTGAAGCGTGCAACTCTTATGTCGGCACGTGCGCGTACATGAGTCCCGACCGGTTCGACCCGGAAGCATATGGCGGGAACTATAACGGTTTTGCTGCGGATATTTGGAGTTTGGGTTTAACCCTATTTGAGCTCTATGTGGGTCATTTTCCATTTCTTCAAGCGGGTCAAAGACCCGATTGGGCTACCCTTATGTGTGCCATTTGCTTCAGCGACCCACCGAGCCTCCCCGAGACCGCATCGCCGGAGTTTCACGATTTTGTCGAGTGCTGCCTCAAGAAGGAGTCCGGGGAGAGGTGGACGGCGGCTCAGCTCTTGACCCACCCGTTTGTGTGCAAAGACCCGGAAACCTGTTAA 960 0.625 MALVRHRRHPNLRLPLPEPSERRPRFPLPLPPTTTIAKPSAGDTIASADLEKLAVLGHGNGGTVYKVRHKTTSATYALKIIHSDADATTRRRAFSETSILRRATDCPHVVRFHGSFENPSGDVAILMEYMDGGTLETALATGGTFSEERLAKVARDVLEGLAYLHARNIAHRDIKPANILVNSEGEVKIADFGVSKLMCRTLEACNSYVGTCAYMSPDRFDPEAYGGNYNGFAADIWSLGLTLFELYVGHFPFLQAGQRPDWATLMCAICFSDPPSLPETASPEFHDFVECCLKKESGERWTAAQLLTHPFVCKDPETC* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1416 319 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Gso9g1416 319 MobiDBLite consensus disorder prediction 1 32 - -
Gso9g1416 319 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 315 - -
Gso9g1416 319 Gene3D Phosphorylase Kinase; domain 1 33 126 - -
Gso9g1416 319 CDD PKc_MAPKK_plant_like 48 312 - -
Gso9g1416 319 SMART serkin_6 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1416 319 Pfam Protein kinase domain 51 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1416 319 Gene3D Transferase(Phosphotransferase) domain 1 127 318 - -
Gso9g1416 319 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 2 315 - -
Gso9g1416 319 ProSiteProfiles Protein kinase domain profile. 50 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1416 319 SUPERFAMILY Protein kinase-like (PK-like) 49 314 IPR011009 -
Gso9g1416 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1416 Gso-Chr9 38195642 38196872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1416 1 315 MAP Kinase Kinase Gene Family AT1G73500 60.443 1.95e-127 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Gso9g1416 Pkinase 3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1416 K20604 - gmx:100804100 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0894 7 10306775 10308070 Gso9g1416 9 38195642 38196872 GST