Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1401 ATGGATGGTGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCCGCCACGTCGTTCAAGAGCCACCTGGGGCTGCAACTGATGTCATCCATGCCGGAAAAACCTCTAATTGGAGGGCGCAATGCTGCGGTTTTAGCAGGCACTAATGGAGCATTTCACCATAGGGACATTGGTGGTATGCCCCAAGCTACATACCCTATGGAATACATGAGGGATGCATGGATTAGTCAGAGAGACAAATATATGAATATGATACCTACAAATCATAACTATGGTGGTATTCCGGAGACATCTTCAGCACATCAAATTCAAATGATTCAAGCTCCGGAATTGCCAAAGGAAGAAAAGCCAGTGGAAGAAGCACCTGTCGTCGAGAAGGCAAACGGAACTCGTAAGAAAAGACAGGGGCCCAAGGTTCCCAAATCTCCCAGGGCTAAGAAGCCAAAGAGGGGGCCTCGTGCACCAAAGGATGAGAATGCTCCCTCAGTTCAACGTGCAAGGGTTCCAAAGAAAACTACTGAAATTGTAATAAACGGAATTGATATGGATATTTCTAGTATTCCGATTCCTGTTTGTTCATGCACTGGAGTGCACCAACAGTGTTATAAATGGGGCTCTGGCGGTTGGCAGTCTGCATGTTGCACGACAGGGATGTCAGTGTATCCTTTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTGTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCGATTGATTTGAGGACTTATTGGGCAAAACATGGCACCAACAAGTTTGTCACCATTAGGTAG 849 0.4535 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLIGGRNAAVLAGTNGAFHHRDIGGMPQATYPMEYMRDAWISQRDKYMNMIPTNHNYGGIPETSSAHQIQMIQAPELPKEEKPVEEAPVVEKANGTRKKRQGPKVPKSPRAKKPKRGPRAPKDENAPSVQRARVPKKTTEIVINGIDMDISSIPIPVCSCTGVHQQCYKWGSGGWQSACCTTGMSVYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1401 282 Pfam GAGA binding protein-like family 1 282 IPR010409 -
Gso9g1401 282 MobiDBLite consensus disorder prediction 111 172 - -
Gso9g1401 282 MobiDBLite consensus disorder prediction 135 152 - -
Gso9g1401 282 MobiDBLite consensus disorder prediction 114 134 - -
Gso9g1401 282 SMART GAGA_bind_2 1 282 IPR010409 -
Gso9g1401 282 PANTHER - 1 282 IPR010409 -
Gso9g1401 282 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1401 Gso-Chr9 38015399 38017075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1401 1 282 BBR or BPC Transcription factor family AT2G01930 50.168 7.95e-95 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Gso9g1401 GAGA_bind 1.7e-112 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1401 - - gmx:100800718 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0912 7 10574609 10576409 Gso9g1401 9 38015399 38017075 GST