Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1391 ATGGCTAATTTTGAGAAAGATGAGGTGCCAATTTTCTCAGATATTCATCCTAAACTATCAAATGAACTTGTTGATTCTAAATTCCCAAGGCGTGTACCTAGGACTCGAAGTGTGTCAATTTCTATTCCTGCGACACTCACAGAGCCATATGAAAGAGATACTAATCTTGTGGGATACACTGGTCCCCTACGGAGTCAGAGAAAAACTCCATTCGATCAGATGAGTGGTCCATTGTATGTTACCAATAAACCTGGAAACCTTTTCCGGCAGAATAGAGTGGCACCAGAGTACCAAACAGCAGAAAGTAAGACAGAAAATTTTCCTTCATGCTGTGGCGTGGGTGAAAATGATTTGCAGAACAACTATGCTGGCAAGAATGAACATTTAATTAGGTCCGGTCCCCTTGGAATGTGTAATGATCCGTATTGTACAACTTGCCCAACTTACTTCAAGGCTACTCAACAAATGACTTCAAAAGCTTCGGGTATATTCAATCCTAAGTTTCGCAATACCCTCTATGGGGATGCTAGGGATTGGGCAAGAAGACTTTTTGATTTCTTGATTCCACTTGTTCCTAGAGTTATGAATCCTCATAATAGACTTGTACAACAATGGAATAAATTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTCTCTGTGCAGAAGAACCATCAATGTATTGTTATAGACTGGACTATGACAAAAATGCTGGTTGTACTTAGAAGCATGAATGATTTCATACACTTCCTAAACATTGTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGTCGAGGGTGGTTGGTGCTGGGGAGTTAGTTGACCATCCTAAGAAAATAGCCCTTCACTACCTTCGGACATCTTTTGTTATTGACTTATTTGTTGTACTTCCACTTCCTCAGATATTCATATTGTTTGTCCAACCGAAACACTTGGGGTCATCAGGAGCAAACTATGCAGGATTAATATTTGAGTCACCATGGGCAAGTTTCTTTATAAATCTTTTTACCTTTATGCTATCTGGCCATGTTGTTGGATCATGGTGGTACCTCTTCGGTTTGCAGAGGGTTAATCAGTGTCTACGAGATGTCTGCCAGAAAGTAATCAAAGAACATAATGAATGCGCAAAATTCATTGATTGTGGGCATGGTCAAGCTGAAGAAAATCAAAATAACCCAACCTTGCATAATTGGAGGAGCAATTCTGAAGCAAGTTCTTGTTTTACTGAAGATGGTTTTCCATATGGGATCTATAATAAAGCTGTTAACCTTACTGCAGATCAAAATGTGATCACTAGATATGTATATTCATCATTTTGGGGATTCCAGCAAATTAGTACTCTGGCTGGCAATTTAACCCCCAGCTATTATGTTTGGGAAGTCATCTTTACCATGGCAATCATAGGATCAGGACTGTTGTTGTTTGCCCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGGCGCAGGAGGCTAGAAATGTCACTTAGACGATGTGATGTTGAGCAATGGATGAGCCATCGGCGCTTAGCGGAAGATCTGAGAAGGAGAGTGCGACAGGCTGAACGATATAACTGGGCCGCAACAAGAGGGGTGAATGAAGAAATGCTCCTGGAGAATTTGCCAGAAGACCTCCAAAGGGACATCAGACGTCATCTCTTTACATTTATTAAGAAAGTTCGAATTTTCGCCTTGTTGGATGAGCCTATCTTGGATGCCATATGTGAGAGGCTAAGACAAAAAACATATATCAAAGGGAGCAAAATTTTTTATGATGGCGGTTTGGTAGAGAAGATGGTTTTCATTGTGCGTGGAAAATTGGAGAGTGTTGGCGAAGATGGAATTAGTGCTCCCCTTTATGAAGGAAGTGTTTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATCCTTTAGCAAGCAAAGTTTCTCTTGTAGGTTGTGGAAAAGCAAGGATTCCAAGGCAAAAGTTGGTTAGTAACCGGACAGTAGGCTGCTTAACGAATGTGGAGGCATTTTCCCTTAGAGCAGCAGACCTTGAAGAAGTTACAAGCCTTTTTGCAAGATTCTTTCGGAGTCCCCGTGTTCAAGGAGCCATAAGGTATGAATCACCTTACTGGAGATGCTTTGCAGCAACAAGCATCCAGGTTGCATGGAGATACAGGATGAAATGTCTTAGTCGTGCTGACACTACACGATCAAATGAAATATCAAAGATTTACAATTCACTGTAA 2265 0.4079 MANFEKDEVPIFSDIHPKLSNELVDSKFPRRVPRTRSVSISIPATLTEPYERDTNLVGYTGPLRSQRKTPFDQMSGPLYVTNKPGNLFRQNRVAPEYQTAESKTENFPSCCGVGENDLQNNYAGKNEHLIRSGPLGMCNDPYCTTCPTYFKATQQMTSKASGIFNPKFRNTLYGDARDWARRLFDFLIPLVPRVMNPHNRLVQQWNKFFAICCLVAIFVDPLFFFLLSVQKNHQCIVIDWTMTKMLVVLRSMNDFIHFLNIVLQFRLAYVAPESRVVGAGELVDHPKKIALHYLRTSFVIDLFVVLPLPQIFILFVQPKHLGSSGANYAGLIFESPWASFFINLFTFMLSGHVVGSWWYLFGLQRVNQCLRDVCQKVIKEHNECAKFIDCGHGQAEENQNNPTLHNWRSNSEASSCFTEDGFPYGIYNKAVNLTADQNVITRYVYSSFWGFQQISTLAGNLTPSYYVWEVIFTMAIIGSGLLLFALLIGNIQNFLQALGRRRLEMSLRRCDVEQWMSHRRLAEDLRRRVRQAERYNWAATRGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEPILDAICERLRQKTYIKGSKIFYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKVSLVGCGKARIPRQKLVSNRTVGCLTNVEAFSLRAADLEEVTSLFARFFRSPRVQGAIRYESPYWRCFAATSIQVAWRYRMKCLSRADTTRSNEISKIYNSL* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1391 754 SMART cnmp_10 573 712 IPR000595 -
Gso9g1391 754 Gene3D Helix hairpin bin 501 565 - -
Gso9g1391 754 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 7 741 - -
Gso9g1391 754 SUPERFAMILY Voltage-gated potassium channels 197 501 - -
Gso9g1391 754 SUPERFAMILY cAMP-binding domain-like 502 697 IPR018490 -
Gso9g1391 754 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 741 - -
Gso9g1391 754 CDD CAP_ED 573 693 IPR000595 -
Gso9g1391 754 Gene3D Jelly Rolls 571 699 IPR014710 -
Gso9g1391 754 ProSiteProfiles cAMP/cGMP binding motif profile. 573 653 IPR000595 -
Gso9g1391 754 Pfam Ion transport protein 205 501 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1391 Gso-Chr9 37835471 37848798 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1391 5 646 Ion Channels AT3G17700 57.864 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1391 K05391 - gmx:100795955 1511.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1749 16 38100953 38113541 Gso9g1391 9 37835471 37848798 GST