Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1388 ATGAAAGAGAATCAACAAGGAAAAGTGGCTAATTTTGAAAAACATGGGGAGCCAGCGCCATCAGAAACACATGCACAACATGATGAACTTGAGAATTCTAGATTTGGGAAAGTGATATCAAGGACAAAAAGTGCATCAATTTCTATTCCTATGGTCTCCATGGAGCCATATGAAAGAGAAACTAGTCTTGTGGGACATACTGGTCCACTTCCTAGTGTGAGAAAATCCCCCATAATGCATGTGAATGGTTCACTATATGCTACCAATGGAACTGAAAATCTATTGCATCAGAGTATATTTGTGAAAGGAAACAAAGTAGTGGAGAGCAAGACAGAAAAAATTTCTACTCTTGACAGGAAAGATGAAAATCATTGGAATAACAACTATGATAGAAAGAATGAACACTTGCTGAGATCTGGGCTACTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCCACTTACTTCAGGGTCTCTCTGCAAAGATTTTCAAAAGCTTCCACTGTCTTTGATCCCCAGTTTCACTTCCACAATGCTCTTTATGGGGATGCCAAGGGTTTGGGGAGAAAAATTATGTCTTTCTTCTCTTCATATGTTCCTGGAGTTATAAATCCTCACTCAAAAGTTGTACAACAATGGAACAAATTTTTGGCCATTTTTTGCATGGTGGCAATTTTTGTGGATCCATTATTTTTTTTCTTAATCTATGTGCAGAAGGGTGGTAAATGTATATCTATCGACTGGGACATGACAAAAGCACTTGTTGTAGTAAGAACCATGAATGATGTTATATATTTCTTGAACATTCTTCTCCAGTTTAGGCTGGCCTATGTTTCTCCTGAGTCAACAGTGGTTGGTGCTGGAGATTTAGTTGATCATCCCAAGAAAATTGCTCTTCATTACTTGAAGGGTTATTTTCTTTTTGACTTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTTTTGGTCCTACCAAAACACTTGGGGACATCAGGAGCAAACTATGCTAAGAATCTTCTGCGTGCAGTGATCCTTGTGCAGTATATTCCCAAATTATTCAGGATTCTGCCTCTGCTAATTGGACAATCTCCAACAGGATTTATATTTGAGTCAGCTTGGGCAAATTTCATTATAAATCTTCTCATTTACATGCTTGCTAGCCATGTTGTTGGATCTTGTTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAGATGCCTGCGGTAATTCTGATATTGATAGATGCATGACAGTCATTGATTGTGGAAGACATGGTCATACCAGAAACAACTATTCAGACCAAACATCATCTCTGTGGAGCAACAATTCAGATGCCATTGCTTGTTTGAATCCCTCCTCTAGTGGTTTCCGTTATGGGATCTATGTCAATGGTGTACCTCTTACTATAGAAACTAGTGTGGCTAACAAATATATTTATTCACTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGTAGTTTAACCCCGAGCTATTTTTGGGGGGAAGTCCTGTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCGGTTCTTGTTGGAAACATACATAACTTTCTCCAAGGTCTTGGACGGAGAAGGCTAGAAATGCAACTTAGAGGCCGCGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGATATAAGAAGGAAAGTACGACAGGCTGAACGGTATAATTGGGCTGCAACCAAGGGAGTGAATGAAGAAATGCTAATGGAGAATTTGCCAGGAGATCTCCAGAGAGAGATACGACGCCATCTCTTCAAATTTGTAAAGAAAGTCCGAATTTTCACCCTGATGGATGAGCCTTTCTTAGATTCCATTTGTCAAAGATTGAGACAGAAGACATACATCAAAGGAAGTATAATTTTGAGTCAAGGTTGTCTAGTAGAGAAGATGATCTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGAAAATGGAATTGGAGTTAGCTTGTCTGAAGGAGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAACATTCTTCTGTAAGCAAAGATGGTAAAAGAGTAAGGCTTCCAGGACAGAGGTGGCTTAGCAACAGGACAGTAAAGTGCTTAACAAATGTGGAGGCTTTTTCAATCCGAGCTGAAGATCTTGAAGAAGTCACAACCCGATTCATGAGATTCTTGCGGAATCTTCGTGTTCAAGGATCCCTAAGGTATGAATCACCTTACTGGAGATCCTTGGCAGCAGTTCGAATCCAGGTTGCATGGAGATACAGGAAGAAACGTAAAAATTGTGTTGATACCTCAAAATTAGATCAATCATTTAACTCATAG 2358 0.3969 MKENQQGKVANFEKHGEPAPSETHAQHDELENSRFGKVISRTKSASISIPMVSMEPYERETSLVGHTGPLPSVRKSPIMHVNGSLYATNGTENLLHQSIFVKGNKVVESKTEKISTLDRKDENHWNNNYDRKNEHLLRSGLLGMCNDPYCTTCPTYFRVSLQRFSKASTVFDPQFHFHNALYGDAKGLGRKIMSFFSSYVPGVINPHSKVVQQWNKFLAIFCMVAIFVDPLFFFLIYVQKGGKCISIDWDMTKALVVVRTMNDVIYFLNILLQFRLAYVSPESTVVGAGDLVDHPKKIALHYLKGYFLFDLFVVFPLPQIMIFLVLPKHLGTSGANYAKNLLRAVILVQYIPKLFRILPLLIGQSPTGFIFESAWANFIINLLIYMLASHVVGSCWYLFGLQRVNQCLRDACGNSDIDRCMTVIDCGRHGHTRNNYSDQTSSLWSNNSDAIACLNPSSSGFRYGIYVNGVPLTIETSVANKYIYSLFWGFQQISTLAGSLTPSYFWGEVLFTMAIIGLGLLLFAVLVGNIHNFLQGLGRRRLEMQLRGRDVEQWMSHRRLPEDIRRKVRQAERYNWAATKGVNEEMLMENLPGDLQREIRRHLFKFVKKVRIFTLMDEPFLDSICQRLRQKTYIKGSIILSQGCLVEKMIFIVRGKLESIGENGIGVSLSEGDACGEELLTWYLEHSSVSKDGKRVRLPGQRWLSNRTVKCLTNVEAFSIRAEDLEEVTTRFMRFLRNLRVQGSLRYESPYWRSLAAVRIQVAWRYRKKRKNCVDTSKLDQSFNS* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1388 785 ProSiteProfiles cAMP/cGMP binding motif profile. 612 680 IPR000595 -
Gso9g1388 785 Gene3D Jelly Rolls 610 734 IPR014710 -
Gso9g1388 785 MobiDBLite consensus disorder prediction 1 37 - -
Gso9g1388 785 SUPERFAMILY Voltage-gated potassium channels 206 541 - -
Gso9g1388 785 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 9 779 - -
Gso9g1388 785 Gene3D - 208 536 - -
Gso9g1388 785 SUPERFAMILY cAMP-binding domain-like 540 739 IPR018490 -
Gso9g1388 785 Gene3D Helix hairpin bin 539 604 - -
Gso9g1388 785 CDD CAP_ED 612 739 IPR000595 -
Gso9g1388 785 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 9 779 - -
Gso9g1388 785 MobiDBLite consensus disorder prediction 1 36 - -
Gso9g1388 785 SMART cnmp_10 612 744 IPR000595 -
Gso9g1388 785 Pfam Ion transport protein 216 537 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1388 Gso-Chr9 37792250 37805880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1388 28 690 Ion Channels AT3G17700 59.820 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1388 K05391 - gmx:112997782 1567.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1747 16 38063857 38087458 Gso9g1388 9 37792250 37805880 GST