Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1379 ATGATGGTTGTGATGAGTGAAAACACTTTCTTTAGCAGAAGCTACAATAAGAAGAGAAAGAAGGGAAGAAGAGAAGAAAAAAAAATGTCACCGGTTGGATTACCACCTGGCTTTAGGTTCCATCCAACCGATGAAGAGCTTGTCAACTATTATCTCAAGAGAAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAAGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGACCCAGAGTGGTATTTTTTTGGACCCCGGGATAGGAAATACCCGAATGGGTTTAGGACAAATAGAGCAACTCGTGCAGGGTACTGGAAGTCCACTGGGAAAGACAGAAGAGTTTCATGCCAAAGCAGACCTATTGGCATGAAGAAGACTTTGGTGTACTATAGAGGCAGAGCTCCTCAAGGGATCAGAACTGACTGGGTAATGCATGAGTATCGCCTTGATGACAAAGAGTGTGAAGACACCACTGGATTACAGGATACTTATGCATTGTGTCGTGTGTTCAAGAAAAATGGAATCTGTTCTGATATTGAAGAGCAAGGACAATGTAATATATCACTAATTGAAAGCTCCCAAACCATAATTAATGAGTGTGAAACCATGTCACCTGACATACCAGGGGCATCATCATCATGCTTGGAAGAGGAGGACAAAGATGATTCATGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGCAATGGTTGGTAGTGAAGAAGTGTCACATGTTACATTTACAAACTAA 798 0.406 MMVVMSENTFFSRSYNKKRKKGRREEKKMSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTTGLQDTYALCRVFKKNGICSDIEEQGQCNISLIESSQTIINECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSNAAMVGSEEVSHVTFTN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1379 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 265 - -
Gso9g1379 265 Gene3D NAC domain 43 187 IPR036093 GO:0003677|GO:0006355
Gso9g1379 265 MobiDBLite consensus disorder prediction 15 35 - -
Gso9g1379 265 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 19 265 - -
Gso9g1379 265 SUPERFAMILY NAC domain 29 184 IPR036093 GO:0003677|GO:0006355
Gso9g1379 265 Pfam No apical meristem (NAM) protein 35 161 IPR003441 GO:0003677|GO:0006355
Gso9g1379 265 ProSiteProfiles NAC domain profile. 34 184 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1379 Gso-Chr9 37663318 37667226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1379 29 254 NAC Transcription Factor Family AT3G17730 75.934 3.67e-133 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso9g1379 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1379 - - gmx:100788036 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1741 16 37982436 37986106 Gso9g1379 9 37663318 37667226 GST