Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1334 ATGTCTTCCCCTCAAGTCATTACCTGCAAAGCTGCAGTGGCATGGAGAGCTGGGGAAGCATTGGTGATGGAGGAAGTAGAAGTGAGTCCTCCCCAACCAATGGAGATTAGGATTAAGGTTGTCTCCACCTCTCTCTGTCGCAGTGATCTCTCCGCTTGGGAATCTCATGCCATATTTCCTCGCATATTTGGCCACGAAGCATCAGGGATTGTTGAGAGTGTGGGACAGGGAGTGACTGAATTCAAAGAGGGGGACCATGTGCTAACAGTATTCATTGGAGAATGCATGTCATGCAGGCAGTGCACATCTGGAAAAAGTAACACTTGCCAAATTTTGGGATTGGAAAGGAGGGGTTTAATGCATAGTGATCAGAAGACACGCTTCTCATTAAAAGGGAAGCCTGTTTACCATTATTGTGCAGTTTCAAGTTTCAGTGAATATACAGTAGTCCATTCTGGATGTGCTGTGAAAGTCAGCCCCCTTGCACCTCTTGAGAAAATATGTCTTCTGAGCTGTGGGGTTGCTGCAGGTCTTGGTGCAGCATGGAATGTTGCTGATGTGTCAAAAGGATCAACTGTGGTGATTTTTGGTCTTGGAACTGTTGGCCTATCTGTTGCTCAAGCTTCCAAACTAAGAGGTGCATCTCGAATAATTGGTGTGGACAACAATCCACAGAAGTGTGAAAATGCCAAAGCTTTTGGGGTTACTGAAGTTGTTGATCCGAATTCCTACAAAGAACCTATAGCTCAGGTTATTAAGCGCATTACTGATGGTGGGGCAGATTTCTCGTTTGAATGTGTAGGTGACACTGATATGATAACCACTGCATTGCAGTCATGCTGTGATGGATGGGGTTTGACTGTAACACTTGGTGTGCCAAAGGTGAAGCCTGAGATGTCTGCTCATTATGGGCTACTCCTAATGGGAAGAACATTGAAAGGATCTCTATTTGGAGGATGGAAACCTAAATCTGATCTTCCTTCATTAGTAGAGAAGTATCTCAACAAGGAAATCCAGATTGATGACTACATAACACACAATTTGTCATTTGATGACATTAACAAAGCTTTCAATCTCATGAAGGAAGGGGAGTGTCTGCGTTGTGTTATCCACATGCCAAGATAA 1125 0.4409 MSSPQVITCKAAVAWRAGEALVMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFPRIFGHEASGIVESVGQGVTEFKEGDHVLTVFIGECMSCRQCTSGKSNTCQILGLERRGLMHSDQKTRFSLKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPLAPLEKICLLSCGVAAGLGAAWNVADVSKGSTVVIFGLGTVGLSVAQASKLRGASRIIGVDNNPQKCENAKAFGVTEVVDPNSYKEPIAQVIKRITDGGADFSFECVGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYLNKEIQIDDYITHNLSFDDINKAFNLMKEGECLRCVIHMPR* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1334 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 64 78 IPR002328 GO:0008270|GO:0016491
Gso9g1334 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 163 336 IPR036291 -
Gso9g1334 374 Gene3D - 12 367 - -
Gso9g1334 374 SUPERFAMILY GroES-like 4 182 IPR011032 -
Gso9g1334 374 SUPERFAMILY GroES-like 323 371 IPR011032 -
Gso9g1334 374 PANTHER ALCOHOL DEHYDROGENASE-LIKE 6 4 372 - -
Gso9g1334 374 CDD alcohol_DH_plants 7 371 - -
Gso9g1334 374 Pfam Zinc-binding dehydrogenase 201 324 IPR013149 -
Gso9g1334 374 Pfam Alcohol dehydrogenase GroES-like domain 34 157 IPR013154 -
Gso9g1334 374 PANTHER ALCOHOL DEHYDROGENASE 4 372 - -
Gso9g1334 374 Gene3D - 177 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1334 Gso-Chr9 37083329 37087983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1334 35 109 Monolignol Biosynthesis Gene Families AT2G21730 40.506 5.48e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1334 K00001 - gmx:100819938 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1334 9 37083329 37087983 Gso9g1334 9 37083329 37087983 ECH