Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1330 ATGGCAATGCCAATAGCTCAATCATGTAAGAAATTTCCATGTCGCATTTTTCTTCTCTTGTTCTTCTTGCTTGGTCACACAAGCTCACAATCTTTGTATGATCAAGAACATGCAGTTTTGCTTAACATAAAGCAATACCTCCAAGACCCTCCATTCCTCTCCCACTGGAATTCAACTTCCTCTCACTGTTCTTGGTCAGAGATCACATGCACCACAAACTCAGTCACTTCCCTCACTCTCTCCCAATCCAACATCAACAGAACAATACCAACCTTCATCTGTGGCCTCACCAACCTCACACACCTTGACTTCAGCTTCAACTTCATCCCTGGTGAATTCCCCACATCCCTCTACAACTGCTCCAAGTTGGAGTACCTAGACCTCTCAAGGAACAACTTTGATGGCAAGGTTCCTCATGACATTGACAAATTGGGTGCTAATTTGCAATATCTCAACCTTGGCTCCACCAACTTCCATGGTGATGTTCCTTCTAGTATTGCAAAGTTGAAGCAATTGAGACAACTTAAGCTTCAGTATTGCCTATTGAATGGCACTGTTGCTGCTGAGATTGATGGCTTGTCCAACCTTGAGTACCTGGACTTGTCCTCTAACTTCTTGTTTCCTGAATGGAAGTTGCCTTGGAACTTGACCAAGTTCAACGAATTGAAGGTGTTTTATCTGTATGGAACCAATTTGGTTGGGGAAATCCCAAAGAGCATTGGAGATATGGTGGCCTTGGAGATGCTGGATATGTCAAATAATAGCTTAGCTGGAGGAATTCCAAGTGGTTTGTTCTTGCTGAAGAATCTGACCTCACTCCTTCTTTATGGAAATAGTCTCTCTGGGGAGATACCAAGTGTGGTTGAGGCATTGAACTTGGTCTATCTTGATCTTGCAAGGAACAATCTTACAGGGAAAATACCTGATGCTTTTGGAAAGCTCCAACAGTTATCATGGTTGAGTTTGTCCTTGAATGGCTTGTCAGGTGTGATACCAGAAAGCTTTGGCAATCTTCCAGCTCTCAAAGATTTTCGCGTGTTTTTCAACAATTTATCAGGTACTCTTCCTCCTGATTTTGGCCGTTACTCAAAGCTTCAAACCTTTATGATTGCATCTAATGGTTTCACTGGGAAGTTACCAGAGAATTTGTGCTATCATGGGATGTTACTTAGCTTGTCTGTTTATGACAATAATCTGAGTGGTGAGTTGCCAGAATTACTAGGAAATTGCAGTGGTTTACTGGATTTGAAAGTTCACAACAATGAGTTTTCTGGTAACATTCCTAGTGGTCTTTGGACATCTTTCAATTTGACAAATTTCATGGTGAGCCGTAACAAGTTCACTGGTGTGCTTCCTGAAAGGCTATCTTGGAATATTTCAAGGTTTGAGATAAGTTACAACCAATTTTCTGGTGGAATTCCAAGTGGAGTATCATCATGGACTAATTTGGTAGTGTTTGATGCAAGTAAGAACAATTTTAATGGAAGTATTCCATGGAAGCTAACGGCTCTTCCTAAGTTAACAACCTTGTTGCTTGATCAGAACCAACTCAGTGGGGCACTTCCATCAGATATAATATCATGGAAATCCTTAGTAACTCTAAATTTGAGCCAAAACCAACTCTCTGGACAAATCCCTAATGCAATTGGTCAGTTACCTGCCCTTAGTCAACTTGATCTATCAGAAAATGAATTCTCTGGCCTAGTTCCTTCTCTACCCCCTAGACTCACCAATCTCAATTTGTCTTTTAATCATTTGACTGGGAGGATTCCAAGTGAATTTGAAAATTCTGTGTTTGCTAGTAGCTTTTTGGGCAATTCTGGTCTTTGTGCTGATACACCAGCACTGAACCTTACCTTATGCAATTCTGGCCTTCAAAGAACAAACAAAGGCTCATCTTGGTCTTTTGGTTTGGTTATAAGTTTGGTGGTAGTAGCCTTGTTACTGGCCCTTTTGGCATCACTCTTGTTTATTAGATTTCACAGAAAAAGAAAGCAAGGATTGGTTAACTCATGGAAGCTCATTTCCTTTGAGAGGCTTAATTTCACAGAATCAAGCATTGTCTCATCAATGACAGAACAAAACATTATTGGTAGTGGTGGATATGGTATAGTATACCGCATTGATGTTGGTTCAGGCTGTGTTGCTGTGAAAAAGATTTGGAATAACAAAAAGTTAGACAAGAAGCTCGAGAATTCTTTCCGTGCAGAAGTTAGAATACTGAGCAATATTCGTCATACCAACATTGTGAGGTTGATGTGTTGTATCTCTAACGAGGATTCTATGCTCCTTGTGTATGAGTATCTGGAAAATCACAGCCTAGATAACTGGCTGCATAAGAAGGTTCAGTCAGGTTCAGTCAGTAAAGTGGTCCTTGATTGGCCAAAGAGGTTGAAAATAGCCATTGGAATTGCTCAAGGTTTGAGCTACATGCACCATGACTGTTCACCACCTGTTGTTCATAGAGATATAAAAGCAAGCAACATCCTTTTGGATACTCAATTCAATGCAAAAGTTGCTGATTTTGGACTAGCTAAGATGTTAATCAAGCCAGGGGAACTTAACACTATGTCATCTGTGATTGGCTCATTTGGCTATATTGCTCCAGAATATGTTCAAACAACACGAGTTAGTGAAAAGATTGATGTGTTTAGCTTTGGGGTAGTCCTATTGGAACTGACAACTGGTAAGGAAGCAAATTATGGAGACCAACACTCATCTCTTTCCGAATGGGCTTGGCGTCACGTTCTTATTGGAGGTAATGTTGAAGAATTGCTAGACAAAGATGTCATGGAAGCCATTTACTCAGATGAAATGTGCACTGTTTTCAAACTTGGGGTCTTGTGCACTGCTACACTGCCTGCTAGTAGGCCTTCCATGAGGGAGGCACTACAAATATTGAAAAGCTTAGGAGAACCATTTGCTTATGGAGATCAGAAGAAATTTGGCCACTACTATGATGCTATTCCCCTTCTCAAGAGTTCAGAAAAGGAAACTAGATTGAATGTTGCTAATCATAGTGAATGA 3027 0.4057 MAMPIAQSCKKFPCRIFLLLFFLLGHTSSQSLYDQEHAVLLNIKQYLQDPPFLSHWNSTSSHCSWSEITCTTNSVTSLTLSQSNINRTIPTFICGLTNLTHLDFSFNFIPGEFPTSLYNCSKLEYLDLSRNNFDGKVPHDIDKLGANLQYLNLGSTNFHGDVPSSIAKLKQLRQLKLQYCLLNGTVAAEIDGLSNLEYLDLSSNFLFPEWKLPWNLTKFNELKVFYLYGTNLVGEIPKSIGDMVALEMLDMSNNSLAGGIPSGLFLLKNLTSLLLYGNSLSGEIPSVVEALNLVYLDLARNNLTGKIPDAFGKLQQLSWLSLSLNGLSGVIPESFGNLPALKDFRVFFNNLSGTLPPDFGRYSKLQTFMIASNGFTGKLPENLCYHGMLLSLSVYDNNLSGELPELLGNCSGLLDLKVHNNEFSGNIPSGLWTSFNLTNFMVSRNKFTGVLPERLSWNISRFEISYNQFSGGIPSGVSSWTNLVVFDASKNNFNGSIPWKLTALPKLTTLLLDQNQLSGALPSDIISWKSLVTLNLSQNQLSGQIPNAIGQLPALSQLDLSENEFSGLVPSLPPRLTNLNLSFNHLTGRIPSEFENSVFASSFLGNSGLCADTPALNLTLCNSGLQRTNKGSSWSFGLVISLVVVALLLALLASLLFIRFHRKRKQGLVNSWKLISFERLNFTESSIVSSMTEQNIIGSGGYGIVYRIDVGSGCVAVKKIWNNKKLDKKLENSFRAEVRILSNIRHTNIVRLMCCISNEDSMLLVYEYLENHSLDNWLHKKVQSGSVSKVVLDWPKRLKIAIGIAQGLSYMHHDCSPPVVHRDIKASNILLDTQFNAKVADFGLAKMLIKPGELNTMSSVIGSFGYIAPEYVQTTRVSEKIDVFSFGVVLLELTTGKEANYGDQHSSLSEWAWRHVLIGGNVEELLDKDVMEAIYSDEMCTVFKLGVLCTATLPASRPSMREALQILKSLGEPFAYGDQKKFGHYYDAIPLLKSSEKETRLNVANHSE* 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1330 1008 Pfam Protein kinase domain 693 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1330 1008 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1000 - -
Gso9g1330 1008 Pfam Leucine rich repeat N-terminal domain 35 70 IPR013210 -
Gso9g1330 1008 Gene3D Ribonuclease Inhibitor 345 621 IPR032675 -
Gso9g1330 1008 Gene3D Ribonuclease Inhibitor 212 344 IPR032675 -
Gso9g1330 1008 SMART LRR_sd22_2 267 293 - -
Gso9g1330 1008 SMART LRR_sd22_2 96 128 - -
Gso9g1330 1008 SMART LRR_sd22_2 193 224 - -
Gso9g1330 1008 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1000 - -
Gso9g1330 1008 SMART LRR_typ_2 314 337 IPR003591 -
Gso9g1330 1008 SMART LRR_typ_2 552 575 IPR003591 -
Gso9g1330 1008 SMART LRR_typ_2 504 528 IPR003591 -
Gso9g1330 1008 SMART LRR_typ_2 193 219 IPR003591 -
Gso9g1330 1008 SMART LRR_typ_2 96 120 IPR003591 -
Gso9g1330 1008 SMART LRR_typ_2 243 267 IPR003591 -
Gso9g1330 1008 SUPERFAMILY L domain-like 45 373 - -
Gso9g1330 1008 SUPERFAMILY RNI-like 292 595 - -
Gso9g1330 1008 ProSiteProfiles Protein kinase domain profile. 691 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1330 1008 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Gso9g1330 1008 Pfam Leucine rich repeat 74 133 IPR001611 GO:0005515
Gso9g1330 1008 Pfam Leucine rich repeat 292 351 IPR001611 GO:0005515
Gso9g1330 1008 Pfam Leucine rich repeat 147 204 IPR001611 GO:0005515
Gso9g1330 1008 ProSitePatterns Protein kinases ATP-binding region signature. 697 719 IPR017441 GO:0005524
Gso9g1330 1008 Gene3D Transferase(Phosphotransferase) domain 1 769 981 - -
Gso9g1330 1008 Gene3D Ribonuclease Inhibitor 146 211 IPR032675 -
Gso9g1330 1008 Gene3D Ribonuclease Inhibitor 35 145 IPR032675 -
Gso9g1330 1008 SMART serkin_6 691 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1330 1008 Gene3D Phosphorylase Kinase; domain 1 670 768 - -
Gso9g1330 1008 SUPERFAMILY Protein kinase-like (PK-like) 685 967 IPR011009 -
Gso9g1330 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1330 Gso-Chr9 37015733 37019521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1330 36 1006 Receptor kinase-like Gene Family AT5G25930 50.456 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso9g1330 Pkinase 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1330 - - gmx:100789972 1934.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1688 16 37486079 37489813 Gso9g1330 9 37015733 37019521 GST