Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1319 ATGAGAAACTCTGAAGCACCAACACATGGTGGCATGATGGAGATAGAAGCAACAACAAGGCCTTCAGGGAATGGTTCGACAACAACCCTACCAGGGTTGAGTCCTCTGAGTGAGACCCTTTGGAGGGAGAAGGCCAACACTGCAGAGATCATTGGTGATGTCTCAGCAAGGCTCACATGGAAGGATCTGACTGTGATGGTAACTCTCAGCAACGGTGAGACACAGAATGTTTTGGAGGGTCTAACTGGTTATGCTGAACCAGGAACCTTCACTGCTCTCATGGGACCCTCTGGCTCAGGAAAATCTACTCTTCTTGATGCACTTTCTAGTCGTTTAGCTGCAAATGCCTTCCTTTCAGGCACCATCCTCCTCAATGGGCGCAAAGCAAAACTCTCTTTTGGCACTGCCGCCTATGTGACACAAGATGACAACTTGATCGGTACCCTAACGGTGAGAGAAACGATATCATATTCAGCTCGTTTGCGTTTGCCGGATAACATGCCATGGGCAGATAAACGTGCTTTGGTTGAGAGCACCATTGTGGCAATGGGGCTCCAAGATTGTGCTGACACAGTGATTGGAAATTGGCACTTGCGTGGGATCAGTGGTGGGGAGAAGAGAAGGGTCAGCATTGCCTTGGAAATCTTGATGAGGCCAAGGTTGCTTTTCCTTGATGAGCCAACCAGTGGACTTGACAGTGCTTCAGCTTTCTTTGTGACTCAGACCCTACGTGCCTTGGCAAGGGATGGAAGAACCGTGATAGCCTCTATTCATCAACCAAGCAGTGAAGTGTTTGAGCTATTTGACCAATTATACTTGCTCTCTAGTGGCAAAACTGTTTATTTTGGGCAAGCTTCAGAGGCATATGAGTTCTTTGCACAAGCTGGCTTTCCATGTCCTGCTTTGAGGAACCCTTCTGATCACTTCCTCAGGTGCATCAATTCTGACTTTGACAAAGTCAAGGCCACCCTTAAAGGGTCCATGAAACTCAGGTTTGAGGGAAGTGATGATCCTTTGGACAGGATCACTACTGCGGAAGCTATCAGAACTCTTATTGACTTCTACCGCACTTCTCAGCACTCTTATGCTGCAAGACAAAAAGTGGACGAGATATCCAGAGTTAAAGGAACTGTGCTTGAAGCTGGAGGAAGTGAGGCTAGTTTTCTGATGCAGTCGTACACCTTAACCAAACGTTCCTTCATCAACATGTCAAGGGACTTTGGCTACTACTGGCTTAGGCTTGTTATCTACATTGTGGTCACTGTTTGTATTGGAACCATTTATTTGAATGTGGGGACAGGCTACAACTCTATTCTGGCTAGAGGTTCTTGTGCATCTTTTGTCTTTGGTTTTGTCACCTTCATGTCAATTGGTGGATTCCCTTCATTTGTTGAAGACATGAAGGTTTTCCAAAGGGAGAGGCTTAATGGCCACTATGGTGTCACTTCATTTGTCATCAGCAACACATTATCTGCAATGCCCTTCCTGATTTTAATCACCTTTCTCTCAGGAACCATTTGTTACTTCATGGTTCGCCTACACCCTGGCTTCTGGCATTACCTCTTCTTTGTGTTGTGCCTTTACGCCAGTGTCACAGTGGTTGAAAGCTTAATGATGGCAATTGCTAGCATTGTCCCCAACTTCCTCATGGGCATCATTATTGGAGCAGGAATTCAGGGCATATTCATGTTGGTCTCAGGCTACTTTAGGCTCCCACATGATATTCCAAAGCCAGTGTGGCGCTACCCAATGTCATACATCAGTTTCCACTTCTGGGCACTACAGGGTCAGTACCAGAACGATTTGCGCGGCTTGGTATTCGACAACCAGACACCGGACCTTCCGAAGATACCGGGCGAATACATCTTGGAGAAAGTGTTCCAAATTGATGTCAACAGATCAAAGTGGATAAACCTGAGTGTGATCTTCAGCATGATTGTGATCTACCGCATCATTTTCTTCATCATGATCAAAGTCAACGAGGATGTTACGCCTTGGGTGAGAGGGTACCTTGCTAGGAGGAGAATGCAGCAGAAGAGTGGAGCACAGAACACTACTATTGCACCTGATGTTCTCACTCAGTCACCATCTCTCAGAACCTATGTTTCCACTCAAACAAAATGA 2124 0.4623 MRNSEAPTHGGMMEIEATTRPSGNGSTTTLPGLSPLSETLWREKANTAEIIGDVSARLTWKDLTVMVTLSNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDNMPWADKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSSGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDRITTAEAIRTLIDFYRTSQHSYAARQKVDEISRVKGTVLEAGGSEASFLMQSYTLTKRSFINMSRDFGYYWLRLVIYIVVTVCIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVTSFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPVWRYPMSYISFHFWALQGQYQNDLRGLVFDNQTPDLPKIPGEYILEKVFQIDVNRSKWINLSVIFSMIVIYRIIFFIMIKVNEDVTPWVRGYLARRRMQQKSGAQNTTIAPDVLTQSPSLRTYVSTQTK* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1319 707 Pfam ABC-2 type transporter 391 597 IPR013525 GO:0016020|GO:0140359
Gso9g1319 707 Pfam ABC transporter 80 229 IPR003439 GO:0005524
Gso9g1319 707 CDD ABCG_EPDR 55 283 - -
Gso9g1319 707 Pfam ABC-2 type transporter 258 314 IPR043926 GO:0140359
Gso9g1319 707 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524
Gso9g1319 707 PANTHER OS04G0528300 PROTEIN 10 703 - -
Gso9g1319 707 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 301 IPR003439 GO:0005524
Gso9g1319 707 MobiDBLite consensus disorder prediction 19 34 - -
Gso9g1319 707 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 10 703 - -
Gso9g1319 707 SMART AAA_5 87 258 IPR003593 -
Gso9g1319 707 Gene3D - 52 296 IPR027417 -
Gso9g1319 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 295 IPR027417 -
Gso9g1319 707 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1319 Gso-Chr9 36895033 36901317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1319 88 289 Calmodulin-binding Proteins AT2G36910 32.394 3.78e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1319 K05681 - gmx:100816389 1390.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1677 16 37399141 37405218 Gso9g1319 9 36895033 36901317 GST