Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1287 ATGGTTCCATCACTTTGTGCTAATGGTTGTGGCTTCTATGGTTCTTCTGCCACCAAGAACCTTTGTTCAAAGTGTTACATAGACTATCTCAAAGAAAACGTCACGAAATCAAAAGAGTGTGAAACCAAGAACTTGAGCGACCAAGCTTTTGTTCTTGATCAGTCATCTGCTACTTCTTGCAAACCATGTGCTTCTGAAGTTTCTAACACTGATGATGCTACTATGGTTGATGTTTCTCTTACCGACCCTGAGGGAATAATAAACAACAAGAGAAAAAAGAGGTGCAAGTGCTGCAACAAAAAGGTTGGGCTATTAGGGTTCGAGTGTCGTTGTGGGGATGTGTTTTGTGGAACACATAGATACCCGGAGAAGCATGCATGCCACGTTGATTTGAAGGAAATTGGTCGTCAAGGTTTGGTTAAACAAAATCCTGTATGTATCGGTGATAAGTTAAAACATAGGATTTAA 468 0.4038 MVPSLCANGCGFYGSSATKNLCSKCYIDYLKENVTKSKECETKNLSDQAFVLDQSSATSCKPCASEVSNTDDATMVDVSLTDPEGIINNKRKKRCKCCNKKVGLLGFECRCGDVFCGTHRYPEKHACHVDLKEIGRQGLVKQNPVCIGDKLKHRI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1287 155 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Gso9g1287 155 Pfam AN1-like Zinc finger 95 128 IPR000058 GO:0008270
Gso9g1287 155 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 155 - -
Gso9g1287 155 Gene3D - 1 68 - -
Gso9g1287 155 SUPERFAMILY AN1-like Zinc finger 85 149 IPR035896 -
Gso9g1287 155 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Gso9g1287 155 Gene3D - 69 148 IPR035896 -
Gso9g1287 155 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 36 - -
Gso9g1287 155 ProSiteProfiles Zinc finger AN1-type profile. 89 135 IPR000058 GO:0008270
Gso9g1287 155 SMART AN1_Zf_4 95 132 IPR000058 GO:0008270
Gso9g1287 155 Pfam A20-like zinc finger 4 26 IPR002653 GO:0003677|GO:0008270
Gso9g1287 155 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1287 Gso-Chr9 36439089 36439729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1287 5 152 C2H2 Transcription Factor Family AT3G52800 35.032 5.03e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1287 - - gmx:102666624 315.079