Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1278 ATGGAGTGCAATAAGGATGAGGCTACCCGAGCTAAAGAAATTGCTGAGAGGAAGTTTGCTGCAAAGGATACATTGGGTGCAAAGAAATTTGCTTTGAAGGCCTTAAATTTATTTCCGGATCTTGAGGGTATTTCTCAAATGGTAGCAACACTTGATGTGTATATTGCTGCCGAGAATAAAACAAATGGAGAAGCAGATTGGTATGGTGTGCTTGGTGTGGACCCCCTTGCTGACGAAGATACTGTCAGGAGACAATACAGGAAGCTAGCTCTCCAGCTTCACCCTGATAAGAACAAGTCCATTGGAGCTGATGGGGCCTTTAAACTCATTTCAGAGGCATGGAGTTTACTATCAGATAAGGCTAAAAGGGCATCGTATGATAAGAGAAGTGGAAGAGACCGGAAAGTTTCTACTAAGTTTGGAGGTCCATCATCACAAAAAGGGACTAATGGTAGTTTCAATTTCACTAAGACCGCCCCTTCATGTGCAACTACTCGGAAGAATACTGCAAAAGAGCATGCTTCATCTTCTACTCATAAGTCAAAATCAAATACATTTTGGACTGTTTGCCGTCGATGCAAAATGCAGTATGAGTATCTTAGAGTTTATCTTAACCTTAAACTCTTATGTCCCAACTGCCATGAGGCATTTGTGGCTGTAGAAACTGCTCCTCCACCTGCAAGTGGTATTAGACCTGCAACTCAATGGAGTTTTTCACAGAAGCAAAATTCCAGCCGCCAACCTAATAAAAGCAAATCTAATGCTGGAAAGAATAACATGGCAGCCCCAAATGTTGGAGGAGGGTCTTGTAGTAAGACTGACTCCTATGAAAAGGCCAATTTCCAGTGGGCTCCATTCTCAAAAATATCTGGTGTTTCTAATGTTGCTCAAGCTGCAAGTGTGGTTCAGCAGGCATATGATAAGGTGAAGCGAGATCGTGAAGAGGCACAAGCAGCTAGGAAAAGGGAAGAGGCCTTAAAAAGGAAGCAGCATGCTTCTAAAAAGGGTTACTATAATCCTTCTAAGAGAAGAAGGGGGGGCATGGAGGATGCTAGTGCGAGTAACCATGGTAAGGAAACAAACTCATTCAGATCTAAACAGGGCAATTTTGAATATAATAGGGTTAATGGAATCAGCAAGACCGGCCATGTGGGAGATATCTCCCCAGTTCAACTGAAGAATCTTCTTATGGAAAAAGCTAGAAAAGAAATTAGCAATAAACTCAGGCAAGTTCAGTCAAATGCTGTTGATAAAACTGCGATGAAAGAGAATGGAAATGACTTCCAAGAAGTGAGTGAGAAAGGAGAAAAATGTTCCAGAAACTCTGAGATGTGTGCTCAGGATAACATTGAGAAGTCAGAAGATAGAAAAAGCGGATCCCGAGCCATCAAGCCATTTGCAGGTTCTACAATTGCTAAAGTTAGCCGAAAATTTTTGGAAACAACACCTGTAGATGTACTATATCCTGATTTCCATGATTTTTGCAAAGATCGAACTGAAGGATCTTTTGGTGAAAATCAAGTATGGGCCGTGTATGATAACGATGATGGGATGCCTCGATGTTATGTGCTGATTCGCCGCATCATCTCCCTGAATCCGTTCAAGATGCAGATCAGTTGGCTCAACCCAAATACCAACAGTGAACTGGGCCCCCTAAAATGGGTTGCTTCAGGCTTTTCAAAAATTTGTGGGGATTTCAGAACAAGCAGACCTGAAATTTGTGGTTCTACCAATTTTTTCTCCCATAAGGTTAGGTGGAGAACTGGTGCTGAGGGAGCCATTTGTATATATCCGAGGAAAGGTGATGTTTGGGCCATATACAGGAACTGGTCTCCTGACTGGAATGAGCTAACAGCAGATGAGGTTATACACAAGTTTGATGTGGTTGAAGTACTTGAGGATTTTATTGAAGGGCATGGTATAGATGTTATTCCTCTGGTCAAAGTGGCTGGATTCAGGACAGTGTTTCACCACCACTTAGATCCAAAAGAAATCAGGATCATTCCGAGGGAAGAGATGTTTCGATTCTCTCATCAAATACCTTCATATGTACTCACTGGTCAAGAAGCTCCAGAGGCTCCAAAGGGTTGCAGGGTGCTGGACCCAGCTGCTACTCCATTTGAACTTCTTCAGGTAATAGAAGTTGTGAAGAAGGAAAACGTGGCAGACGATGAGGATAGTGATGTAAAAAAAACAAGTGATAACATGAAAAAAGATAATGATGAGGAAATGATCGATGCTATGGGAAAACATGGGGAAGAAAAGGAGGCAAAAGACGAAGACATGCAGGAAGTAGAACCAAGTGATAACATGAAAAAAGGCAATGAGGAAATGACCAATGATACCGGAAGACTTAGGGAAGAAAAGGAGGGAAAGGACAAAGACATGCAGGAGGTAGAAACTTTGAAAGAGGACAAAGAGAGAGAAGATTTGCAGTAG 2439 0.4211 MECNKDEATRAKEIAERKFAAKDTLGAKKFALKALNLFPDLEGISQMVATLDVYIAAENKTNGEADWYGVLGVDPLADEDTVRRQYRKLALQLHPDKNKSIGADGAFKLISEAWSLLSDKAKRASYDKRSGRDRKVSTKFGGPSSQKGTNGSFNFTKTAPSCATTRKNTAKEHASSSTHKSKSNTFWTVCRRCKMQYEYLRVYLNLKLLCPNCHEAFVAVETAPPPASGIRPATQWSFSQKQNSSRQPNKSKSNAGKNNMAAPNVGGGSCSKTDSYEKANFQWAPFSKISGVSNVAQAASVVQQAYDKVKRDREEAQAARKREEALKRKQHASKKGYYNPSKRRRGGMEDASASNHGKETNSFRSKQGNFEYNRVNGISKTGHVGDISPVQLKNLLMEKARKEISNKLRQVQSNAVDKTAMKENGNDFQEVSEKGEKCSRNSEMCAQDNIEKSEDRKSGSRAIKPFAGSTIAKVSRKFLETTPVDVLYPDFHDFCKDRTEGSFGENQVWAVYDNDDGMPRCYVLIRRIISLNPFKMQISWLNPNTNSELGPLKWVASGFSKICGDFRTSRPEICGSTNFFSHKVRWRTGAEGAICIYPRKGDVWAIYRNWSPDWNELTADEVIHKFDVVEVLEDFIEGHGIDVIPLVKVAGFRTVFHHHLDPKEIRIIPREEMFRFSHQIPSYVLTGQEAPEAPKGCRVLDPAATPFELLQVIEVVKKENVADDEDSDVKKTSDNMKKDNDEEMIDAMGKHGEEKEAKDEDMQEVEPSDNMKKGNEEMTNDTGRLREEKEGKDKDMQEVETLKEDKEREDLQ* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1278 812 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Gso9g1278 812 MobiDBLite consensus disorder prediction 139 159 - -
Gso9g1278 812 MobiDBLite consensus disorder prediction 354 368 - -
Gso9g1278 812 Coils Coil 302 329 - -
Gso9g1278 812 PANTHER BNAC03G44070D PROTEIN 1 711 - -
Gso9g1278 812 Pfam DnaJ domain 66 127 IPR001623 -
Gso9g1278 812 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Gso9g1278 812 Pfam Domain of unknown function (DUF3444) 484 689 IPR024593 -
Gso9g1278 812 PANTHER BNAA04G14940D PROTEIN 1 711 - -
Gso9g1278 812 SMART dnaj_3 65 122 IPR001623 -
Gso9g1278 812 MobiDBLite consensus disorder prediction 226 271 - -
Gso9g1278 812 MobiDBLite consensus disorder prediction 312 331 - -
Gso9g1278 812 SUPERFAMILY Chaperone J-domain 62 126 IPR036869 -
Gso9g1278 812 MobiDBLite consensus disorder prediction 232 271 - -
Gso9g1278 812 CDD DnaJ 66 119 IPR001623 -
Gso9g1278 812 MobiDBLite consensus disorder prediction 312 368 - -
Gso9g1278 812 Gene3D DnaJ domain 63 184 IPR036869 -
Gso9g1278 812 Coils Coil 785 809 - -
Gso9g1278 812 PRINTS DnaJ domain signature 68 86 IPR001623 -
Gso9g1278 812 PRINTS DnaJ domain signature 86 101 IPR001623 -
Gso9g1278 812 PRINTS DnaJ domain signature 102 122 IPR001623 -
Gso9g1278 812 PRINTS DnaJ domain signature 122 141 IPR001623 -
Gso9g1278 812 MobiDBLite consensus disorder prediction 722 812 - -
Gso9g1278 812 MobiDBLite consensus disorder prediction 127 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1278 Gso-Chr9 36356921 36362160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1278 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.906 1.34e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1278 - - gmx:100816712 1627.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1649 16 37173167 37178733 Gso9g1278 9 36356921 36362160 GST