Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1265 ATGGAGGAAAGAGAGATTTTTAGTTCTGGGCATGCTGTTAAGGTTGTCGAGGCCCCCCAGAGCTTCCACGTAGCACTAAACTCCGTGCAGTTTTCCGGGCCCACAGTGGAGTCACCGGTGCCTTCTCCAGTTCCGGCATCGGCACCGGCACCGGCGCCGGTGAGTGCTTCGGTGATGAATTCAGGTAGTACGGAAGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGGACCGGACGGCAAGGTGGCGCTGTCGCCGATGCCGATATCGGCGTCGATTCCGTTGACCGGAGACTTCTCAGCCTGGAAAAGGGGAAGAGGGAAGCCACTTGAATCAATCAAGAAGTCTTTTAAGTTTTATGAAGCTGGAGGTGCAGGACCAGGTGATGGAATTGCATACTCAGTTGGTGCCAATTTCACACCTCACATCCTTACAGTAAATGAAGGCGAGGATGTTACTATGAAGATTATGTCCTTCTCTCAACAAGGATGTCAAGCAATTTGCATTCTGTCTGCAAATGGCACAATTTCAAATGTTACACTACGCCAACCAACTTCTTCTGGTGGTACTTTAACATATGAGGGGCGTTTTGAAATTCTCTCCTTGTCTGGTTCATATATAACAACTGAGAATGGATTAACAAAGAGCAGATCTGGTGGGATGAGCATCTCTTTGGCCGCTCCAGATGGTCGAGTAATGGGGGGTGGATTGGCTGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTGTTCCTGGTCATCAGCTGGAGCAACAGAAACCAAAGAAGCCGAGAGTGGAGCATATATCAATGGCTGCTCCGACGTATGTCAACCCTACTTCTGCTGAAGAAATAAGAATTGGTCTTGGTGGAGTAAAGCCAATCATGACACCGGCTGCTTTTCAAGTGCACCACATTTTTGGCAATGGTCAAAGCTCTGGGAACTCAGCTTCTGATGATTCAGCTCCTTTCCCTGAAAACGAGTCCAACCCTAGCCATGCAGATGCTGGAGTTGCATGCTAA 1035 0.4928 MEEREIFSSGHAVKVVEAPQSFHVALNSVQFSGPTVESPVPSPVPASAPAPAPVSASVMNSGSTEGKKKRGRPRKYGPDGKVALSPMPISASIPLTGDFSAWKRGRGKPLESIKKSFKFYEAGGAGPGDGIAYSVGANFTPHILTVNEGEDVTMKIMSFSQQGCQAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGGMSISLAAPDGRVMGGGLAGLLVAAGPVQVVVASFVPGHQLEQQKPKKPRVEHISMAAPTYVNPTSAEEIRIGLGGVKPIMTPAAFQVHHIFGNGQSSGNSASDDSAPFPENESNPSHADAGVAC* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1265 344 MobiDBLite consensus disorder prediction 33 83 - -
Gso9g1265 344 MobiDBLite consensus disorder prediction 311 344 - -
Gso9g1265 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 7 331 - -
Gso9g1265 344 Gene3D - 141 276 - -
Gso9g1265 344 MobiDBLite consensus disorder prediction 311 332 - -
Gso9g1265 344 ProSiteProfiles PPC domain profile profile. 136 279 IPR005175 -
Gso9g1265 344 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 7 331 IPR039605 GO:0003680
Gso9g1265 344 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 258 - -
Gso9g1265 344 CDD DUF296 140 254 IPR005175 -
Gso9g1265 344 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 255 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1265 Gso-Chr9 36162254 36168090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1265 56 270 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 62.445 1.45e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1265 - - gmx:102667678 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1635 16 37025810 37033169 Gso9g1265 9 36162254 36168090 GST
Gso9g1265 9 36162254 36168090 Gso10g1616 10 42699229 42706469 PCT
Gso10g1616 10 42699229 42706469 Gso9g1265 9 36162254 36168090 PCT