Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g1255 | ATGGAAAAAGCTGTGTTGGTGTTGGCTTTTGTGGGCAAGTTGAGAAGGCACTTTCTGCTGCTTGTTGTGGCAATGGTGCTTGTGCTGTTACTCTCTTCATTTGCTTCACCACTCAGCGATGAAGGACAAGCATTGATGAAGATTAAGGCTTCATTCAGCAATGTAGCAGATGTTCTGCATGATTGGGATGATTTGCATAATGATGACTTCTGTTCTTGGCGCGGAGTCTTGTGCGACAATGTCAGCCTTACTGTGTTTTCTCTGAATTTGTCAAGCTTGAATCTTGGTGGGGAGATATCACCCGCTATTGGTGACTTGGTAACCTTGCAATCCATAGACCTGCAGGGAAATAAACTAACTGGTCAAATTCCAGATGAAATTGGAAACTGTGCTGAACTTATTTATCTGGATTTGTCTGATAATCAACTATATGGTGATTTACCTTTCTCCATATCAAAGCTAAAGCAGCTTGTGTTTCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTATCCCCTCAACATTAACCCAAATTCCAAACTTGAAGACTCTTGATCTTGCACGAAATAGACTCACTGGTGAGATTCCTAGATTGCTCTATTGGAATGAAGTATTGCAGTACCTGGGGTTACGAGGGAACATGTTGAGTGGAACTCTGTCCTCTGATATCTGTCAATTGACTGGTTTGTGGTATTTTGATGTGAGAGGCAACAATTTGACTGGCACCATACCTGACAGCATTGGAAACTGTACAAATTTTGCAATCTTGGATCTTTCATACAATCAGATTTCTGGGGAGATTCCCTATAATATTGGATTTCTTCAAGTGGCTACGTTGTCGCTTCAAGGAAATAGACTAACTGGGAAGATTCCAGAAGTCTTTGGTTTAATGCAAGCCCTTGCCATTTTGGATTTGAGTGAGAATGAGCTAATAGGACCCATCCCTCCCATACTAGGCAATTTGTCTTATACTGGAAAGCTGTATCTTCATGGAAACATGCTTACTGGAACAATACCTCCCGAACTTGGCAATATGTCAAGACTAAGCTACCTACAATTGAATGACAATCAAGTAGTAGGCCAAATCCCTGATGAACTTGGGAAACTCAAACATTTGTTTGAATTGAATCTTGCCAATAATCATCTTGAAGGATCTATTCCACTTAACATTAGCTCATGCACTGCCATGAATAAGTTTAATGTGCATGGAAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTAGCAGCCTTGGAAGCTTGACTTACTTAAATCTTTCTGCAAACAATTTCAAAGGGAGTATACCTGTTGATTTGGGCCATATAATAAATCTTGACACATTGGATCTATCTAGCAATAATTTTTCAGGGTATGTTCCAGGGTCTGTTGGTTATCTTGAGCATCTTCTGACCTTGAACTTGAGCCATAATAGTCTTGAGGGTCCCTTGCCTGCTGAATTTGGGAATCTTAGAAGCATACAGATTTTTGATATGGCATTCAACTATCTGTCGGGTAGCATCCCTCCGGAAATTGGTCAGCTGCAGAATCTTGCGTCTCTGATTTTGAACAACAATGATCTGAGTGGGAAGATTCCAGATCAGCTTACAAATTGCTTAAGTCTTAACTTCCTGAATGTCTCATACAATAACTTATCTGGGGTCATTCCTCTCATGAAGAACTTCTCATGGTTTTCTGCTGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGTTGGGATCCATATGTGATCCTTACATGCCAAAATCCAAAGTGGTTTTTTCAAGGGCTGCAATTGTTTGTCTCATTGTTGGTACCATCACATTATTGGCCATGGTAATTATAGCAATCTACAGATCAAGCCAATCAATGCAATTGATTAAAGGATCTAGTGGAACTGGGCAAGGCCCCCCCAAGCTTGTAATTCTTCACATGGGCTTGGCCATCCATACCTTTGATGACATTATGAGAGTTACTGAGAATCTCAATGCGAAGTATATTGTAGGGTATGGTGCCTCTGGTACTGTGTACAAGTGTGCTTTAAAGAATTCCCGGCCAATTGCAATTAAGCGACCATACAACCAGCATCCACACAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAATATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTCCCTTGAAAAAGGTAAAACTTGATTGGGAGGCACGCCTGAGGATTGCCATGGGAGCTGCTGAAGGACTTGCTTACCTCCATCATGACTGCAATCCTAGAATCATTCACAGGGATATAAAGTCCTCAAACATCTTGCTAGATGAAAACTTTGAAGCTCGTCTCTCTGATTTTGGCATTGCCAAATGTTTGTCAACCACAAGAACTCATGTGTCAACGTTTGTTCTTGGAACAATAGGCTATATTGACCCTGAGTATGCCCGGACATCTAGGCTGAATGAAAAATCCGATGTGTATAGCTTTGGAATTGTTCTACTTGAGCTACTAACTGGGAAGAAAGCAGTGGACAACGATTCCAACTTGCATCACTTAATATTATCCAAGGCAGATAACAACACTATAATGGAGACTGTGGATCCTGAGGTGTCTATTACCTGCATGGATCTGACCCATGTTAAGAAGACGTTTCAGCTTGCTCTTCTTTGCACAAAAAGAAATCCTTCCGAGAGGCCAACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTCCCAGCACCTCCCAGTAAAAATATATTTGTACCTTCTTCAAACACCATTGATTATGCACAATTTGTGATTCAAAAGGTAAACAAAAACAGCCTTCACACCCCACAAATGGATCAATGGTTTGTTCGCTTTGAGGATGTTGTATCAAATAACAGCCTCTAG | 2955 | 0.4078 | MEKAVLVLAFVGKLRRHFLLLVVAMVLVLLLSSFASPLSDEGQALMKIKASFSNVADVLHDWDDLHNDDFCSWRGVLCDNVSLTVFSLNLSSLNLGGEISPAIGDLVTLQSIDLQGNKLTGQIPDEIGNCAELIYLDLSDNQLYGDLPFSISKLKQLVFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSSDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFAILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVFGLMQALAILDLSENELIGPIPPILGNLSYTGKLYLHGNMLTGTIPPELGNMSRLSYLQLNDNQVVGQIPDELGKLKHLFELNLANNHLEGSIPLNISSCTAMNKFNVHGNHLSGSIPLSFSSLGSLTYLNLSANNFKGSIPVDLGHIINLDTLDLSSNNFSGYVPGSVGYLEHLLTLNLSHNSLEGPLPAEFGNLRSIQIFDMAFNYLSGSIPPEIGQLQNLASLILNNNDLSGKIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSWFSADSFIGNPLLCGNWLGSICDPYMPKSKVVFSRAAIVCLIVGTITLLAMVIIAIYRSSQSMQLIKGSSGTGQGPPKLVILHMGLAIHTFDDIMRVTENLNAKYIVGYGASGTVYKCALKNSRPIAIKRPYNQHPHNSREFETELETIGNIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPLKKVKLDWEARLRIAMGAAEGLAYLHHDCNPRIIHRDIKSSNILLDENFEARLSDFGIAKCLSTTRTHVSTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLILSKADNNTIMETVDPEVSITCMDLTHVKKTFQLALLCTKRNPSERPTMHEVARVLASLLPAPPSKNIFVPSSNTIDYAQFVIQKVNKNSLHTPQMDQWFVRFEDVVSNNSL* | 985 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g1255 | 984 | Gene3D | Transferase(Phosphotransferase) domain 1 | 738 | 939 | - | - | |
Gso9g1255 | 984 | Pfam | Leucine rich repeat N-terminal domain | 39 | 79 | IPR013210 | - | |
Gso9g1255 | 984 | SMART | LRR_typ_2 | 106 | 130 | IPR003591 | - | |
Gso9g1255 | 984 | SMART | LRR_typ_2 | 513 | 537 | IPR003591 | - | |
Gso9g1255 | 984 | SMART | LRR_typ_2 | 417 | 441 | IPR003591 | - | |
Gso9g1255 | 984 | SMART | LRR_typ_2 | 226 | 250 | IPR003591 | - | |
Gso9g1255 | 984 | SMART | LRR_typ_2 | 178 | 202 | IPR003591 | - | |
Gso9g1255 | 984 | SMART | LRR_typ_2 | 369 | 393 | IPR003591 | - | |
Gso9g1255 | 984 | SMART | LRR_typ_2 | 465 | 488 | IPR003591 | - | |
Gso9g1255 | 984 | SUPERFAMILY | RNI-like | 243 | 556 | - | - | |
Gso9g1255 | 984 | SMART | serkin_6 | 662 | 932 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g1255 | 984 | Pfam | Leucine Rich repeat | 250 | 266 | IPR001611 | GO:0005515 | |
Gso9g1255 | 984 | Pfam | Leucine Rich repeat | 179 | 194 | IPR001611 | GO:0005515 | |
Gso9g1255 | 984 | Pfam | Protein kinase domain | 666 | 925 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g1255 | 984 | Gene3D | Ribonuclease Inhibitor | 203 | 276 | IPR032675 | - | |
Gso9g1255 | 984 | Pfam | Leucine rich repeat | 443 | 502 | IPR001611 | GO:0005515 | |
Gso9g1255 | 984 | Pfam | Leucine rich repeat | 108 | 167 | IPR001611 | GO:0005515 | |
Gso9g1255 | 984 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED | 29 | 960 | - | - | |
Gso9g1255 | 984 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 783 | 795 | IPR008271 | GO:0004672|GO:0006468 | |
Gso9g1255 | 984 | Gene3D | Ribonuclease Inhibitor | 38 | 202 | IPR032675 | - | |
Gso9g1255 | 984 | SUPERFAMILY | Protein kinase-like (PK-like) | 640 | 928 | IPR011009 | - | |
Gso9g1255 | 984 | Gene3D | Ribonuclease Inhibitor | 277 | 586 | IPR032675 | - | |
Gso9g1255 | 984 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 29 | 960 | - | - | |
Gso9g1255 | 984 | ProSiteProfiles | Protein kinase domain profile. | 662 | 932 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso9g1255 | 984 | SUPERFAMILY | L domain-like | 38 | 332 | - | - | |
Gso9g1255 | 984 | Gene3D | Phosphorylase Kinase; domain 1 | 637 | 737 | - | - | |
Gso9g1255 | 984 | ProSiteProfiles | Leucine-rich repeat profile. | 180 | 202 | IPR001611 | GO:0005515 | |
Gso9g1255 | 984 | ProSitePatterns | Protein kinases ATP-binding region signature. | 668 | 690 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g1255 | Gso-Chr9 | 35988956 | 35997440 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g1255 | 107 | 984 | Receptor kinase-like Gene Family | AT5G07180 | 74.773 | 0.0 | 1331 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIIIb | Gso9g1255 | Pkinase | 3.5e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g1255 | K20718 | - | gmx:100800185 | 1914.04 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso16g1627 | 16 | 36930405 | 36938368 | Gso9g1255 | 9 | 35988956 | 35997440 | GST |