Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1255 ATGGAAAAAGCTGTGTTGGTGTTGGCTTTTGTGGGCAAGTTGAGAAGGCACTTTCTGCTGCTTGTTGTGGCAATGGTGCTTGTGCTGTTACTCTCTTCATTTGCTTCACCACTCAGCGATGAAGGACAAGCATTGATGAAGATTAAGGCTTCATTCAGCAATGTAGCAGATGTTCTGCATGATTGGGATGATTTGCATAATGATGACTTCTGTTCTTGGCGCGGAGTCTTGTGCGACAATGTCAGCCTTACTGTGTTTTCTCTGAATTTGTCAAGCTTGAATCTTGGTGGGGAGATATCACCCGCTATTGGTGACTTGGTAACCTTGCAATCCATAGACCTGCAGGGAAATAAACTAACTGGTCAAATTCCAGATGAAATTGGAAACTGTGCTGAACTTATTTATCTGGATTTGTCTGATAATCAACTATATGGTGATTTACCTTTCTCCATATCAAAGCTAAAGCAGCTTGTGTTTCTGAATTTAAAGAGTAATCAGTTGACTGGTCCTATCCCCTCAACATTAACCCAAATTCCAAACTTGAAGACTCTTGATCTTGCACGAAATAGACTCACTGGTGAGATTCCTAGATTGCTCTATTGGAATGAAGTATTGCAGTACCTGGGGTTACGAGGGAACATGTTGAGTGGAACTCTGTCCTCTGATATCTGTCAATTGACTGGTTTGTGGTATTTTGATGTGAGAGGCAACAATTTGACTGGCACCATACCTGACAGCATTGGAAACTGTACAAATTTTGCAATCTTGGATCTTTCATACAATCAGATTTCTGGGGAGATTCCCTATAATATTGGATTTCTTCAAGTGGCTACGTTGTCGCTTCAAGGAAATAGACTAACTGGGAAGATTCCAGAAGTCTTTGGTTTAATGCAAGCCCTTGCCATTTTGGATTTGAGTGAGAATGAGCTAATAGGACCCATCCCTCCCATACTAGGCAATTTGTCTTATACTGGAAAGCTGTATCTTCATGGAAACATGCTTACTGGAACAATACCTCCCGAACTTGGCAATATGTCAAGACTAAGCTACCTACAATTGAATGACAATCAAGTAGTAGGCCAAATCCCTGATGAACTTGGGAAACTCAAACATTTGTTTGAATTGAATCTTGCCAATAATCATCTTGAAGGATCTATTCCACTTAACATTAGCTCATGCACTGCCATGAATAAGTTTAATGTGCATGGAAATCATTTAAGTGGTTCAATTCCTTTGAGCTTTAGCAGCCTTGGAAGCTTGACTTACTTAAATCTTTCTGCAAACAATTTCAAAGGGAGTATACCTGTTGATTTGGGCCATATAATAAATCTTGACACATTGGATCTATCTAGCAATAATTTTTCAGGGTATGTTCCAGGGTCTGTTGGTTATCTTGAGCATCTTCTGACCTTGAACTTGAGCCATAATAGTCTTGAGGGTCCCTTGCCTGCTGAATTTGGGAATCTTAGAAGCATACAGATTTTTGATATGGCATTCAACTATCTGTCGGGTAGCATCCCTCCGGAAATTGGTCAGCTGCAGAATCTTGCGTCTCTGATTTTGAACAACAATGATCTGAGTGGGAAGATTCCAGATCAGCTTACAAATTGCTTAAGTCTTAACTTCCTGAATGTCTCATACAATAACTTATCTGGGGTCATTCCTCTCATGAAGAACTTCTCATGGTTTTCTGCTGACAGCTTCATTGGAAATCCATTATTATGTGGAAATTGGTTGGGATCCATATGTGATCCTTACATGCCAAAATCCAAAGTGGTTTTTTCAAGGGCTGCAATTGTTTGTCTCATTGTTGGTACCATCACATTATTGGCCATGGTAATTATAGCAATCTACAGATCAAGCCAATCAATGCAATTGATTAAAGGATCTAGTGGAACTGGGCAAGGCCCCCCCAAGCTTGTAATTCTTCACATGGGCTTGGCCATCCATACCTTTGATGACATTATGAGAGTTACTGAGAATCTCAATGCGAAGTATATTGTAGGGTATGGTGCCTCTGGTACTGTGTACAAGTGTGCTTTAAAGAATTCCCGGCCAATTGCAATTAAGCGACCATACAACCAGCATCCACACAACTCAAGGGAGTTTGAGACAGAACTTGAAACTATTGGCAATATCAGACACAGGAATCTTGTCACTTTGCATGGTTATGCTCTAACTCCTAATGGAAATCTTCTTTTCTATGACTATATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGTCCCTTGAAAAAGGTAAAACTTGATTGGGAGGCACGCCTGAGGATTGCCATGGGAGCTGCTGAAGGACTTGCTTACCTCCATCATGACTGCAATCCTAGAATCATTCACAGGGATATAAAGTCCTCAAACATCTTGCTAGATGAAAACTTTGAAGCTCGTCTCTCTGATTTTGGCATTGCCAAATGTTTGTCAACCACAAGAACTCATGTGTCAACGTTTGTTCTTGGAACAATAGGCTATATTGACCCTGAGTATGCCCGGACATCTAGGCTGAATGAAAAATCCGATGTGTATAGCTTTGGAATTGTTCTACTTGAGCTACTAACTGGGAAGAAAGCAGTGGACAACGATTCCAACTTGCATCACTTAATATTATCCAAGGCAGATAACAACACTATAATGGAGACTGTGGATCCTGAGGTGTCTATTACCTGCATGGATCTGACCCATGTTAAGAAGACGTTTCAGCTTGCTCTTCTTTGCACAAAAAGAAATCCTTCCGAGAGGCCAACCATGCATGAGGTTGCCAGGGTTTTGGCATCACTACTCCCAGCACCTCCCAGTAAAAATATATTTGTACCTTCTTCAAACACCATTGATTATGCACAATTTGTGATTCAAAAGGTAAACAAAAACAGCCTTCACACCCCACAAATGGATCAATGGTTTGTTCGCTTTGAGGATGTTGTATCAAATAACAGCCTCTAG 2955 0.4078 MEKAVLVLAFVGKLRRHFLLLVVAMVLVLLLSSFASPLSDEGQALMKIKASFSNVADVLHDWDDLHNDDFCSWRGVLCDNVSLTVFSLNLSSLNLGGEISPAIGDLVTLQSIDLQGNKLTGQIPDEIGNCAELIYLDLSDNQLYGDLPFSISKLKQLVFLNLKSNQLTGPIPSTLTQIPNLKTLDLARNRLTGEIPRLLYWNEVLQYLGLRGNMLSGTLSSDICQLTGLWYFDVRGNNLTGTIPDSIGNCTNFAILDLSYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVFGLMQALAILDLSENELIGPIPPILGNLSYTGKLYLHGNMLTGTIPPELGNMSRLSYLQLNDNQVVGQIPDELGKLKHLFELNLANNHLEGSIPLNISSCTAMNKFNVHGNHLSGSIPLSFSSLGSLTYLNLSANNFKGSIPVDLGHIINLDTLDLSSNNFSGYVPGSVGYLEHLLTLNLSHNSLEGPLPAEFGNLRSIQIFDMAFNYLSGSIPPEIGQLQNLASLILNNNDLSGKIPDQLTNCLSLNFLNVSYNNLSGVIPLMKNFSWFSADSFIGNPLLCGNWLGSICDPYMPKSKVVFSRAAIVCLIVGTITLLAMVIIAIYRSSQSMQLIKGSSGTGQGPPKLVILHMGLAIHTFDDIMRVTENLNAKYIVGYGASGTVYKCALKNSRPIAIKRPYNQHPHNSREFETELETIGNIRHRNLVTLHGYALTPNGNLLFYDYMENGSLWDLLHGPLKKVKLDWEARLRIAMGAAEGLAYLHHDCNPRIIHRDIKSSNILLDENFEARLSDFGIAKCLSTTRTHVSTFVLGTIGYIDPEYARTSRLNEKSDVYSFGIVLLELLTGKKAVDNDSNLHHLILSKADNNTIMETVDPEVSITCMDLTHVKKTFQLALLCTKRNPSERPTMHEVARVLASLLPAPPSKNIFVPSSNTIDYAQFVIQKVNKNSLHTPQMDQWFVRFEDVVSNNSL* 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1255 984 Gene3D Transferase(Phosphotransferase) domain 1 738 939 - -
Gso9g1255 984 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Gso9g1255 984 SMART LRR_typ_2 106 130 IPR003591 -
Gso9g1255 984 SMART LRR_typ_2 513 537 IPR003591 -
Gso9g1255 984 SMART LRR_typ_2 417 441 IPR003591 -
Gso9g1255 984 SMART LRR_typ_2 226 250 IPR003591 -
Gso9g1255 984 SMART LRR_typ_2 178 202 IPR003591 -
Gso9g1255 984 SMART LRR_typ_2 369 393 IPR003591 -
Gso9g1255 984 SMART LRR_typ_2 465 488 IPR003591 -
Gso9g1255 984 SUPERFAMILY RNI-like 243 556 - -
Gso9g1255 984 SMART serkin_6 662 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1255 984 Pfam Leucine Rich repeat 250 266 IPR001611 GO:0005515
Gso9g1255 984 Pfam Leucine Rich repeat 179 194 IPR001611 GO:0005515
Gso9g1255 984 Pfam Protein kinase domain 666 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1255 984 Gene3D Ribonuclease Inhibitor 203 276 IPR032675 -
Gso9g1255 984 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
Gso9g1255 984 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Gso9g1255 984 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERL1-RELATED 29 960 - -
Gso9g1255 984 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Gso9g1255 984 Gene3D Ribonuclease Inhibitor 38 202 IPR032675 -
Gso9g1255 984 SUPERFAMILY Protein kinase-like (PK-like) 640 928 IPR011009 -
Gso9g1255 984 Gene3D Ribonuclease Inhibitor 277 586 IPR032675 -
Gso9g1255 984 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 29 960 - -
Gso9g1255 984 ProSiteProfiles Protein kinase domain profile. 662 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1255 984 SUPERFAMILY L domain-like 38 332 - -
Gso9g1255 984 Gene3D Phosphorylase Kinase; domain 1 637 737 - -
Gso9g1255 984 ProSiteProfiles Leucine-rich repeat profile. 180 202 IPR001611 GO:0005515
Gso9g1255 984 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1255 Gso-Chr9 35988956 35997440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1255 107 984 Receptor kinase-like Gene Family AT5G07180 74.773 0.0 1331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Gso9g1255 Pkinase 3.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1255 K20718 - gmx:100800185 1914.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1627 16 36930405 36938368 Gso9g1255 9 35988956 35997440 GST