Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1248 ATGGTAGAGCTCTCAAAAAGTAACACAATCATGCCTTCCAGTAAGACTCTCCTCCTCATAACTAATCTCACCCTTCTCAGTTTTGCAACAACTGAGGCACAAAACGACCCTTTCTATCTATACAAAGATTGTTCCAGCGACAAAACCAGCCCCAACACCTCCTTCCAATTTAACCTCAAGAACCTCCTTTCTTCCCTATCATCCAACGCCACCGGCAACACCCCATTTTACAACGCCACAATCAATGGCGAAAACCCCTCTGACTCTATCTATGGACTTTTCATGTGTAGGGCTGACGTGTCCTCTCACCTCTGCCAACTATGCGTCCGGAATGCAACCCAACAACTATCATCAGAATGCTCCTTATCCAAACAAGCAGTCATATGGTACGAGGAGTGCATGGTTTGGTATTCCACGTCTTTTATTTTCTCCAGTGTGGCCACAACACCTAGTAGTCCCATGAAGAACAGTGGTAAAGTCCCAAAGCCAGAAAGATTCATGCGTTTAGTGTTCAGGACAATAAACCAAACTGCAGATGAAGCATCATTCCAATCAAGTATTGGTAACAATAAGTTCGCAACAAAGGAAGCAACAAACGTGTCAGGAATATCTCAGACTCAAACCCTTTATTGTTTAGCTCAGTGCATACCGAATCTTTCACCACATGATTGTAGAACATGCCTTGATGATGCAATAAGGAAAATTCAAGAGTGTTGTGAAGGAAGGATAGGAGGGAGAGTTCTGTTTCCTAGCTGCAATGTTAGGTATGAAATGTACCCTTTCTACAATGTTCGTTCAGCAACTCCTGTACCAAAGCTTATTCCTGAAACAAAAACTTCCCATGCAGATTCAAATTTATCAGAATTTCCTATTTATCTTTCTCATAATTGCACAAACAAAACCTTCAATGCCAACAACAGTGCTTTCCAAACACACCTCACCACACTCTTATTTAACCTAGCTTCTAATGCCACAACCGGGAACAAGTTTTATACGGCTGATGTGGCTAACACAGTGTTTGGTCTCTTCTTGTGCCGAGACCAAGAGGATCTTCCTTCAGGGCTTTGTGGTGAGTGTGTCAAAAACGCAACGCATGAAATATCATCAAAGTGTGGCTCGTTCCATGAGGCTATAATTTGGTACAGCCAGTGCATGCTTCGCTATTCCTATAGAAATTTTTTCAATGAAATGGAAACAGGTCCTGTGTTTTCTGAGTTGAACACCACCAACAAGGATGATGAACAAAATTTCTTTACGATGAAGTTAGCGAAGGCGTTAGATCAAGCGGCGATCCAGGCAGGGGACAGTGATGAGAAATACGGAAAAAGGACGACAAAATTGAATGATTTGCAAACCCTTTATGCTCTTGCTCAGTGCACACAAAATTTGTCTATTGAAGATTGCAAGGGTTGTCTGGGAATTGTGATTGGAACATCAATTCCATGGTCTCGTTTGGGAAGCATAGGGGGAAGAGTTTTGTATCCTAGCTGCAATATCAGGTTTGAATTGTTCCAATTCTACAAAGACAATGACAAATCTGGGACGTCATCATCACCAGAAAGAAGAAAAGGCAAGTCGCCAATAATTATCTTGATTGTTGTGTTGGCAAGTATTTCTGTGACGTTATTCTTTGCAGCTTACTATTTTCTACATAAAAATGCAAGAAAGAGGCGTGCAGCTATTCTCGAAGATAATTTTGGTCTTGAAATGGCTACTTTAGAGTCGTTGCAATTTGATTTGGCTACCATTATAGCAGCAACTAATAGATTTTCAGACCAGAATAAAATAGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTCTTGATGGATTACAAATAGCTGTAAAGAGATTATCAAAAAGTTCAAAGCAAGGATCAAATGAGTTCAAGAATGAAGTTTTATTAATAGCCAAACTTCAACATAGAAATCTTGTGACTCTAATTGGTTTTTGCCTTGAGGAACAAGAAAAAATACTTATTTATGAATATGTGCCAAACAAGAGCCTTGATTACTTTCTATTTGATTTTGGTCTCGCCAGAATTGTTGAAATAAATCAAGACCAAGGGAGTACAAGTGTAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTCGGACAATTTTCTGAGAAGTCAGATGTTTTCAGTTTTGGTGTCATGGTTTTAGAGATTATAAGTGGAAAAAAGAATTTCAGTTCTTATGAATCACACCGTATTACTAATGGCCTCTTAAGCTATGTTTGGAAACAATGGAGTGATCACACACCTTTGAACATATTGGACCCAGATATTACTGAAAATTATTCTGAAATTGAGGTCATCAAGTGCATTCAGATTGGTTTATTATGCGTTCAACAAGACCCTGATGCTAGACCTACAATGGTGACAGTTGCTTCATATCTGACTAGTCACCCTATTGAATTGCCAACACCACAAGAGCCTGCATTTTTCTTGCATGGTAGAATGGATGAAAATGCAGTTGCGAATGAATCAAGTTCCAACCAATCGATCAACACTTCTACACCATTAATATTCTCTAACAATCAAATGTCTATAAGCCAATTTCTTCCTCGATAA 2592 0.3927 MVELSKSNTIMPSSKTLLLITNLTLLSFATTEAQNDPFYLYKDCSSDKTSPNTSFQFNLKNLLSSLSSNATGNTPFYNATINGENPSDSIYGLFMCRADVSSHLCQLCVRNATQQLSSECSLSKQAVIWYEECMVWYSTSFIFSSVATTPSSPMKNSGKVPKPERFMRLVFRTINQTADEASFQSSIGNNKFATKEATNVSGISQTQTLYCLAQCIPNLSPHDCRTCLDDAIRKIQECCEGRIGGRVLFPSCNVRYEMYPFYNVRSATPVPKLIPETKTSHADSNLSEFPIYLSHNCTNKTFNANNSAFQTHLTTLLFNLASNATTGNKFYTADVANTVFGLFLCRDQEDLPSGLCGECVKNATHEISSKCGSFHEAIIWYSQCMLRYSYRNFFNEMETGPVFSELNTTNKDDEQNFFTMKLAKALDQAAIQAGDSDEKYGKRTTKLNDLQTLYALAQCTQNLSIEDCKGCLGIVIGTSIPWSRLGSIGGRVLYPSCNIRFELFQFYKDNDKSGTSSSPERRKGKSPIIILIVVLASISVTLFFAAYYFLHKNARKRRAAILEDNFGLEMATLESLQFDLATIIAATNRFSDQNKIGKGGFGEVYKGILLDGLQIAVKRLSKSSKQGSNEFKNEVLLIAKLQHRNLVTLIGFCLEEQEKILIYEYVPNKSLDYFLFDFGLARIVEINQDQGSTSVIVGTYGYMSPEYAMFGQFSEKSDVFSFGVMVLEIISGKKNFSSYESHRITNGLLSYVWKQWSDHTPLNILDPDITENYSEIEVIKCIQIGLLCVQQDPDARPTMVTVASYLTSHPIELPTPQEPAFFLHGRMDENAVANESSSNQSINTSTPLIFSNNQMSISQFLPR* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1248 863 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 289 512 - -
Gso9g1248 863 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 677 852 - -
Gso9g1248 863 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 26 273 - -
Gso9g1248 863 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 519 676 - -
Gso9g1248 863 ProSiteProfiles Gnk2-homologous domain profile. 399 506 IPR002902 -
Gso9g1248 863 ProSiteProfiles Protein kinase domain profile. 507 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1248 863 Pfam Salt stress response/antifungal 413 502 IPR002902 -
Gso9g1248 863 Pfam Salt stress response/antifungal 297 389 IPR002902 -
Gso9g1248 863 Pfam Salt stress response/antifungal 44 139 IPR002902 -
Gso9g1248 863 Pfam Salt stress response/antifungal 163 258 IPR002902 -
Gso9g1248 863 Gene3D Phosphorylase Kinase; domain 1 552 660 - -
Gso9g1248 863 ProSiteProfiles Gnk2-homologous domain profile. 37 142 IPR002902 -
Gso9g1248 863 SUPERFAMILY Protein kinase-like (PK-like) 576 830 IPR011009 -
Gso9g1248 863 Gene3D - 290 393 IPR038408 -
Gso9g1248 863 Gene3D - 36 141 IPR038408 -
Gso9g1248 863 Gene3D - 401 506 IPR038408 -
Gso9g1248 863 Gene3D - 149 261 IPR038408 -
Gso9g1248 863 ProSiteProfiles Gnk2-homologous domain profile. 148 261 IPR002902 -
Gso9g1248 863 ProSiteProfiles Gnk2-homologous domain profile. 291 393 IPR002902 -
Gso9g1248 863 Gene3D Transferase(Phosphotransferase) domain 1 661 810 - -
Gso9g1248 863 ProSitePatterns Protein kinases ATP-binding region signature. 596 618 IPR017441 GO:0005524
Gso9g1248 863 Pfam Protein tyrosine and serine/threonine kinase 677 803 IPR001245 GO:0004672|GO:0006468
Gso9g1248 863 Pfam Protein tyrosine and serine/threonine kinase 593 675 IPR001245 GO:0004672|GO:0006468
Gso9g1248 863 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 289 512 - -
Gso9g1248 863 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 677 852 - -
Gso9g1248 863 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 273 - -
Gso9g1248 863 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 519 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1248 Gso-Chr9 35891025 35895848 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1248 290 863 Receptor kinase-like Gene Family AT4G05200 38.438 3.65e-136 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso9g1248 PK_Tyr_Ser-Thr 3.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1248 - - gmx:100808174 1636.7