Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1243 ATGCTAGCTAGACCTCTAAAAATTAACACATCCATGGCTTACTTCAAGCTTCCCTTCCTCATTATCATCCTTGTTACCTTGCTCAATTTTTCAACAAGTCACGCACAAGACGACCCTTTTTACCTTTACCAATATTGCTCAAGCAACAGAACCACTGCCAACACCTCCTTCCAAATAAACCTCAGAACCCTCCTCTCTTCCCTTTCATCTCACGCCACCGGCGACACCCAATTCTACAACACAACATTCACCGGAACCAACCCCTCCGACACAATCTACGCCATGTTCATGTGTAGGGGCGACGTCCCTTCTCAGCTTTGTCAAGCATGCGTCATAAACGCCACTCAAAGACTCTCCTCAGAATGCTCCTTGTCCAAAGAATCGGTGTTTTGGTACGACGAGTGCATGGTTTGGTATTCCACCAACCCGATCTTCACCACCGTGGCCACAACTCCGAGTTTTCACTTGTTGAACACGGGCAACGTCTCGAACCCTCAAACCTTCATGCGTTTGTTGTTTCAGACCATGAACCAAACCGGAGAAGAAGCAGCAAGTAACCCTAAAAAGTTCGCCACAAGGGAAGTATTAGTTTCTGAACTTCAATCCCTTTATTGTCTCGTACAGTGCACACCCAACCTTTCACCCCATGATTGCAAAACGTGTCTCGATGAAATCATAGGAGAACTTCCATCATGTTGTCAGGGAAAAATAGGAGGGAGAGTTCTAAATCCAAGTTGTAACATTAGGTATGAAATGTACCCTTTCTTTCTCTCCACTCTTAATACACAAACACCAAAGCTAGTTCCTGAGACAAAATTTTCCGAGGAAGACACAAAGTTTTCAGAAGACCCAGTTTATCTCTCTCACAATTGCTTAAGTAGCAAAACCTTCACTGTCAGTAGCACTTTCCAGAAAAGCCTCAACACCCTCTTCTCTTACTTGTCTTCCAACGCCACAAACGGCAAGTCGTTTCATGATGCAAATATAAACAACCAAGTGTATGGTCTCTTCATGTGCCGAGGTGATGTTCCTTCTCCTAACTGTGAACAGTGCGTTTTAAACGCAACTCATCGAATGTTATCAGAGTGTGGTTCATTTCAAGAGGCTATAATTTGGTACAGTCACTGCTTGCTTCGCTATTCACATCGGAATTTCTTCAACATGGTAGAAAAAAGTCCCGTGTTCTCGAGGCTGAATATCACGCGTTTCTCAAGCCCCGATCAGGGACAAAAATTCTTCATTTTCGTGTTGTCGAATGCGTTGTCGAAAGTTGCTATTGAAGCAGGGGACAGTGATGAGAGATTCGGAACCAAATCGTTGAAACTGAATGATTTGCAAACGCTTTATACTCTTGGTCAGTGTACACGGGATTTGACCAGTGATGATTGTAAGGGGTGTTTGGGGGATGTTATTGGACCCGGAATTCCATGGTCTCGTTTGGGGAGTGTAGGGGGAAGAGTTATGTACCCTAGCTGCAATCTGCGATTTGAATTGGTCCAATTTTACAAGGATGGTGACCAAGCTGCTACGCCTTCTTCATCAGAGAAAAGACAAAACAAGTCTCGGTTAATTATCTTAATTATTGTGCCCACGTTAGTTTCAATAATGGTCTTCTCCGTTGGCTACTATTTACTAAGGAGACAAGCAAGAAAGAGTTTTAGGACCATTCTCAAAGAAAATTTTGGTCATGAAAGCGCCATTTTAGAGCCATTGCAATTTGATTTGGCTGTAATTGAAGCGGCGACTAACAACTTCTCCAATGAGAACTGTATTGGCAAAGGTGGATTTGGAGAAGTTTACAAGGGGATATTACCTGATGGGCAACAAATAGCAGTAAAGAGACTTTCAAGAAGTTCTAAGCAAGATTCTAAACGGCAAAAATTGTTAAGTTGGTGTGAACGCTACAACATCATAGGAGGAATTGCTCAAGGAATCTTATATTTACATGAACATTCTCGACTCAAAGTTATACATCGTGATCTCAAACCTAGTAATATTTTATTGGATGAAAATATGATTCCAAAAATCTCAGATTTTGGTCTAGCTAGAATTGTTGAAATAAATCAAGACAAAGGAAATACAAATAAAATTGTTGGAACATTAGGTTATATGTCTCCGGAATATGCAATGCTTGGACAATTTTCGGAGAAATCTGATGTTTTCAGTTTTGGAGTCATGATTTTAGAAATTATTACTGGAAAAAAGAATGTAAATTCATATGAATCACAACGGATTGGTCATAGCCTCCTAAGTTATGTTTGGAAGCAATGGAGGGATCATGCACCGTTAAGCATATTGGACCCAAATATGAAAGGAAGTTTTCCTGAAATTGAAGTAATTAGGTGCGTTCACATTGGCTTATTATGTGTTCAACAATATCCTGATGCTAGACCAACAATGGCAACAATTGTTTCATATATGAGCAATCATTTGATTAATTTACCAACTCCACAAGAGCATGCATTTTTGTTGCAAATGGATCCAAAAGCAATTGTACAAGAATCAAGTTCCAGCCAATCTTCCACACTATTGTCCAACAACGAAATATCTATAACCGAATTTCTTCCTCGATAG 2574 0.4068 MLARPLKINTSMAYFKLPFLIIILVTLLNFSTSHAQDDPFYLYQYCSSNRTTANTSFQINLRTLLSSLSSHATGDTQFYNTTFTGTNPSDTIYAMFMCRGDVPSQLCQACVINATQRLSSECSLSKESVFWYDECMVWYSTNPIFTTVATTPSFHLLNTGNVSNPQTFMRLLFQTMNQTGEEAASNPKKFATREVLVSELQSLYCLVQCTPNLSPHDCKTCLDEIIGELPSCCQGKIGGRVLNPSCNIRYEMYPFFLSTLNTQTPKLVPETKFSEEDTKFSEDPVYLSHNCLSSKTFTVSSTFQKSLNTLFSYLSSNATNGKSFHDANINNQVYGLFMCRGDVPSPNCEQCVLNATHRMLSECGSFQEAIIWYSHCLLRYSHRNFFNMVEKSPVFSRLNITRFSSPDQGQKFFIFVLSNALSKVAIEAGDSDERFGTKSLKLNDLQTLYTLGQCTRDLTSDDCKGCLGDVIGPGIPWSRLGSVGGRVMYPSCNLRFELVQFYKDGDQAATPSSSEKRQNKSRLIILIIVPTLVSIMVFSVGYYLLRRQARKSFRTILKENFGHESAILEPLQFDLAVIEAATNNFSNENCIGKGGFGEVYKGILPDGQQIAVKRLSRSSKQDSKRQKLLSWCERYNIIGGIAQGILYLHEHSRLKVIHRDLKPSNILLDENMIPKISDFGLARIVEINQDKGNTNKIVGTLGYMSPEYAMLGQFSEKSDVFSFGVMILEIITGKKNVNSYESQRIGHSLLSYVWKQWRDHAPLSILDPNMKGSFPEIEVIRCVHIGLLCVQQYPDARPTMATIVSYMSNHLINLPTPQEHAFLLQMDPKAIVQESSSSQSSTLLSNNEISITEFLPR* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1243 857 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 623 842 - -
Gso9g1243 857 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 278 505 - -
Gso9g1243 857 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 514 622 - -
Gso9g1243 857 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 264 - -
Gso9g1243 857 ProSiteProfiles Gnk2-homologous domain profile. 285 385 IPR002902 -
Gso9g1243 857 Pfam Protein kinase domain 626 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1243 857 Gene3D Transferase(Phosphotransferase) domain 1 620 820 - -
Gso9g1243 857 ProSiteProfiles Gnk2-homologous domain profile. 39 144 IPR002902 -
Gso9g1243 857 SUPERFAMILY Protein kinase-like (PK-like) 569 841 IPR011009 -
Gso9g1243 857 SMART serkin_6 585 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1243 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Gso9g1243 857 ProSiteProfiles Gnk2-homologous domain profile. 391 501 IPR002902 -
Gso9g1243 857 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 514 622 - -
Gso9g1243 857 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 278 505 - -
Gso9g1243 857 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 623 842 - -
Gso9g1243 857 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 27 264 - -
Gso9g1243 857 Gene3D Transferase(Phosphotransferase) domain 1 572 619 - -
Gso9g1243 857 Pfam Salt stress response/antifungal 291 382 IPR002902 -
Gso9g1243 857 Pfam Salt stress response/antifungal 161 252 IPR002902 -
Gso9g1243 857 Pfam Salt stress response/antifungal 419 497 IPR002902 -
Gso9g1243 857 Pfam Salt stress response/antifungal 46 141 IPR002902 -
Gso9g1243 857 ProSitePatterns Protein kinases ATP-binding region signature. 591 613 IPR017441 GO:0005524
Gso9g1243 857 ProSiteProfiles Gnk2-homologous domain profile. 150 255 IPR002902 -
Gso9g1243 857 Gene3D - 284 385 IPR038408 -
Gso9g1243 857 Gene3D - 39 143 IPR038408 -
Gso9g1243 857 Gene3D - 396 501 IPR038408 -
Gso9g1243 857 Gene3D - 149 255 IPR038408 -
Gso9g1243 857 ProSiteProfiles Protein kinase domain profile. 496 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1243 Gso-Chr9 35599189 35607579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1243 281 857 Receptor kinase-like Gene Family AT4G05200 39.939 2.40e-141 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso9g1243 Pkinase 7.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1243 - - gmx:100806048 1694.09