LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso9g1241	ATGGCCAAGACCCTAATGGGAAACGTGGCTTTCTTCCTAACAACCTATCTTCTACTTTTCACAATGTTGTTCCCGGCAAATGCTCAATTTGCTAAGAAGACTTATCTCATTCAAATGGATAAGTCAGCAATGCCAAAAGCCTTCCCCAACCACCTTGAATGGTATTCATCAAAGGTGAAATCAGCACTGTCCACATCTCCAGAAGCTGATATGGACAATGAGGAGAGAATAATCTACACTTACCAGAATGCTTTTCATGGAGTTGCAGCCAAGTTGACTGAAGAAGAAGCTGAGAAGCTAGAGGCTGAAGAAGGTGTTGTGACCATATTCCCTGAAAAAAAGTATGAGCTACACACCACAAGAAGTCCAACATTCCTTGGTCTTGAACCAGAAAAAAGCACTAATATGTGGTCAGAAAAGCTAGCTGGCCATGATGTAATAGTGGGAGTGTTAGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAAAGATGTAGGCTTGAGACCGGTACCTTCTCATTGGAAAGGTACATGTGAGATTGGAACAGGCTTCACAAATAGTCACTGCAATAAAAAGGTTGTGGGGGCAAGAGTGTTCTACCATGGATATGAAGCAGCAATTGGTAGAATTAATGAGCAAAAAGAGTATAAGTCACCAAGAGATCAAGATGGTCATGGCACTCACACAGCAGCTACAGTTGGTGGCTCTCCTGTGCATGGAGCTAACCTTCTTGGTTATGCTAATGGCACAGCCAGAGGAATGGCACCAGGTACAAGGATTGCAGCTTACAAAGTGTGTTGGATTGGTGGCTGCTTCAGCTCAGACATTGTATCAGCTATTGATAAAGCTGTGGCTGATGGTGTGAATGTTCTTTCCATCTCTTTAGGTGGTGGAGTCTCCTCTTACTACAGGGATAGTTTATCTGTGGCTGCATTTGGAGCAATGGAGAGGGGTGTTTTTGTTTCATGTTCTGCTGGAAATTCAGGACCTGACCCTGCTAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTTCCTTCAGATGTTAAGCTTGGGAATGGCAAAAAAATTATTGGAGTTTCACTCTATAAAGGGAAAAATGTGCTATCAATTAAGAAACAATACCCTTTGGTGTACTTGGGGAGCAACTCTAGTAGGGTTGATCCAAGATCTATGTGCTTGGAAGGGACTTTGGATCCTAAAGTGGTGTCAGGAAAGATAGTAATTTGTGATAGAGGCCTTAGTCCTAGAGTGCTGAAGGGTCATGTGGTGAGAAGTGCAGGAGGGGTGGGAATGATTCTCACTAACACTGAAGCCAATGGGGAAGAACTGGTTGCAGATTCTCACCTCCTTCCAGCAGTAGCGATAGGAGAGAAAGAAGGAAAAGAACTCAAAAGTTATGTCCTATCAAGTAAAACTGCTACTGCAGCTCTAGCTTTTAAAGGTACAATATTAGGAATAAAACCATCTCCTGTAGTGGCAGCATTTTCATCAAGAGGGCCTAATTTTCTCAGCCTTGAAATTCTGAAGCCTGACTTAGTGGCTCCTGGGGTGAACATTCTTGCTGCATGGAGTGAGGCCATTGGTCCATCAGGTTTGAAAATAGACAACAGAAGAGTGAAGTTCAATATAGTCTCTGGCACCTCAATGTCATGCCCTCATGTGAGTGGCGTAGCAGCTTTGGTCAAGTCTAGGCACCCTGAGTGGAGTCCTGCAGCTATAAAATCTGCTTTGATGACAACATCTTATGTTCTTGACAACACCAAGAAAACACTCAGAGATTCCTCAACTGCCAAACCATCAAGTCCTTATGATCATGGTGCTGGACACATTGACCCTATTAGAGCTCTTGACCCTGGTTTGGTCTATGACATGGTGCCACAGGACTACTTTGAATTTCTGTGCACACAGAATCTGACTCCAACACAGCTAAAAGTTTTTGCCAAATATTCAAACAGATCTTGTAGACACTCTCTTGCAAGTTCAGGGGACTTGAACTACCCAGCCATATCATCGGTGTTTACTCAGAAAACAACCACTTCATTCCCTAGTCCAGTGATTCTTCACAGAATTGTCACCAATGTTGGCCCTCCTGATTCCAAATACCATGTTGTGGTGTCACCATTCAAAGGTGCTTCTATCAAAGTTGAGCCAGAAACCTTGAATTTTACCAGAAAACACCAGAAGCTGTCTTACAAGATTACCTTCAAGCCAAAGGTTCGGCAAACCTCGCCCGAATTCGGAAGTCTAGTATGGAAGGATGGTTTCCACACTGTGAGAAGCCCCATTGTGATAACATGGCTGCCACCACCAATGTGA	2346	0.4386	MAKTLMGNVAFFLTTYLLLFTMLFPANAQFAKKTYLIQMDKSAMPKAFPNHLEWYSSKVKSALSTSPEADMDNEERIIYTYQNAFHGVAAKLTEEEAEKLEAEEGVVTIFPEKKYELHTTRSPTFLGLEPEKSTNMWSEKLAGHDVIVGVLDTGIWPESESFKDVGLRPVPSHWKGTCEIGTGFTNSHCNKKVVGARVFYHGYEAAIGRINEQKEYKSPRDQDGHGTHTAATVGGSPVHGANLLGYANGTARGMAPGTRIAAYKVCWIGGCFSSDIVSAIDKAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMERGVFVSCSAGNSGPDPASLTNVSPWITTVGASTMDRDFPSDVKLGNGKKIIGVSLYKGKNVLSIKKQYPLVYLGSNSSRVDPRSMCLEGTLDPKVVSGKIVICDRGLSPRVLKGHVVRSAGGVGMILTNTEANGEELVADSHLLPAVAIGEKEGKELKSYVLSSKTATAALAFKGTILGIKPSPVVAAFSSRGPNFLSLEILKPDLVAPGVNILAAWSEAIGPSGLKIDNRRVKFNIVSGTSMSCPHVSGVAALVKSRHPEWSPAAIKSALMTTSYVLDNTKKTLRDSSTAKPSSPYDHGAGHIDPIRALDPGLVYDMVPQDYFEFLCTQNLTPTQLKVFAKYSNRSCRHSLASSGDLNYPAISSVFTQKTTTSFPSPVILHRIVTNVGPPDSKYHVVVSPFKGASIKVEPETLNFTRKHQKLSYKITFKPKVRQTSPEFGSLVWKDGFHTVRSPIVITWLPPPM*	782

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso9g1241	781	Pfam	Peptidase inhibitor I9	34	118	IPR010259	-
	Gso9g1241	781	CDD	PA_subtilisin_like	357	485	-	-
	Gso9g1241	781	Gene3D	-	351	494	-	-
	Gso9g1241	781	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	22	775	IPR045051	-
	Gso9g1241	781	Pfam	Subtilase family	143	597	IPR000209	GO:0006508\|GO:0008236
	Gso9g1241	781	PRINTS	Subtilisin serine protease family (S8) signature	143	162	IPR015500	-
	Gso9g1241	781	PRINTS	Subtilisin serine protease family (S8) signature	221	234	IPR015500	-
	Gso9g1241	781	PRINTS	Subtilisin serine protease family (S8) signature	555	571	IPR015500	-
	Gso9g1241	781	Pfam	Fibronectin type-III domain	673	774	IPR041469	-
	Gso9g1241	781	ProSiteProfiles	KRAB-related domain profile.	80	145	IPR003655	GO:0006355
	Gso9g1241	781	Gene3D	Peptidase S8/S53 domain	145	639	IPR036852	GO:0004252\|GO:0006508
	Gso9g1241	781	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	25	118	IPR037045	-
	Gso9g1241	781	ProSiteProfiles	Serine proteases, subtilase domain profile.	114	626	-	-
	Gso9g1241	781	CDD	Peptidases_S8_3	115	592	IPR034197	-
	Gso9g1241	781	SUPERFAMILY	Subtilisin-like	117	630	IPR036852	GO:0004252\|GO:0006508
	Gso9g1241	781	Gene3D	-	643	776	-	-
	Gso9g1241	781	Pfam	PA domain	383	473	IPR003137	-
	Gso9g1241	781	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.7	22	775	-	-
	Gso9g1241	781	ProSitePatterns	Serine proteases, subtilase family, serine active site.	556	566	IPR023828	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso9g1241	Gso-Chr9	35556729	35559417	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso9g1241	11	779	Subtilisin-like Serine Gene Family	AT5G51750	68.571	0.0	1097

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso9g1241	-		-	gmx:100803915	1538.47

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso16g1616	16	36797286	36799972	Gso9g1241	9	35556729	35559417	GST
	Gso9g1241	9	35556729	35559417	Gso20g1222	20	42195070	42197893	PCT
	Gso9g1241	9	35556729	35559417	Gso10g2156	10	48602400	48605289	PCT
	Gso20g1222	20	42195070	42197893	Gso9g1241	9	35556729	35559417	PCT
	Gso10g2156	10	48602400	48605289	Gso9g1241	9	35556729	35559417	PCT