Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1239 ATGCCATCCCGACAATTATCCACGTCACCAGACATACCCGACCCGTACCCGTTTCCGCAGCCACCGCCACGTCATCACCACCACCATCACTTTCTCACTCCTCTCCTTGCCGCCACCGTCTCAACATGCTCCCTTCTCCTCCTCCTCATCCTCTTCTGCCACCGCACCCTCACCCGCAAACGCGCCACCACCCACCTCCCTTCTCCGGCCGCCACCTCCCCACCGCACCGCCTCTCCTTCTCCGTCCTCCGTCGCGCCACCAACTCCTTCTCCACGCGCCTCGGCCACGGCGGCTTCGGCCCCGTCTTCGCTGGCACCCTTGCCGGCGCCCCCGTCGCCGTCAAGCTCATGGATTCCAACACCAATCACCAACAGGGCGAGCGCGAGTTCCACAACGAACTCTTCTTCGCCTCGAAGCTCCTCTCCCGCCACGTCATCACCGCCACGCACTTCTCCTCCGACCCTAAACGACGCCATTTCCTCTTGGTCTACGAGCTCATGCAAAACGGCAACCTCCAAGACGCGCTTTTGCACCGCAAGTGCCCCGAACTCTTAAACTGGAACACGCGCTTCTCAATTATCCTCAACGTAGGGAAAGGTATTCACTTTCTTCACTCCTATGACCCCCCTGTAATTCATGGAGACATAAAACCGAGTAACGTTTTGCTTGATCGCGATTTCTGGCCGAGGATTGGGGACTTTGGGCTTGCGAGGTTGAGCTCGGATACTCCGAGGTTTGAAGTTGAGGTTCTGGAATGTGGGAGTGTTGATAATGATGAAGAGAAGATGAAGACGAAGAAGAAGAAGGAGGAGGAGGAGGTTGTTGTTGTTGATGATTGTGGATCGGTGGAGAGTGCTCATAGTGTTTTTATGGAGGAGGGTGACATGGGGGTGGAGCAATCGCCTTCGCCGGAGATGGCGGCGATGACTTCGCCAGAGACCAATTTGGCAGTGGCGGAGGCCTCGCCCGGGTTTGAGAAGGGTAGTGCGCAGAGTGAGAAGGAGGGTGTGAAGAAGATTAATGAGAAAGGGTTGAAGAGTAATTCTGTGAGGGATTGGTGGTGGAAGCATGAGGATGAGGTTGGGGTTGGGGAGGGTAAAAAGGTTAAGGATTATGTGATGGAATGGATTGGTAGGGATGTGAATAAGGAAAGGGTGAAGAGTGGAATTGAGTTGGAAAATGTGGAGATAGGGAAGGAAGAGAAAAATAAGAAGGAGAAGAAGAGAAGGAAGAAGGAATTGGAATGGTGGGAATCAATGGAAGAGGAAAAGTTTGATGGTGTTGTGAAGGGGAAGAGAAGGACGGTGAGGGAATGGTGGAAGGAGGAGTGTTTTGAGGAGAATGCGAATGCGAAGACGACAAAGAAGAAGAAGAAGGAGAAGAAAAAGAGGAAGGGTGGGAGTGTGAAGAGTGATGATGATGAGAATTGTGGTGATGATTGGTGGATGAGTGATGATGCAATGGATAAGAGGAAGGGCAAGAGTAGGAGTAGGAACAACCGTGGGAACATGGATTGCTGGATGGATGGGTTGAGTGGTGAGTTATGGAGAGGGAGGAGGAATAATAGCTTTGATTCTGCTAGTGGGGAGATTCCAAAGAGTGGTGGTGTGAGTAGTACTCCTAGTATTAGGGGAACTGTGTGTTATGTTGCTCCTGAGTGTGGCTATGGTGGGGAAGTGTCTGAGAAGTGTGATGTGTATAGCTTTGGGGTGTTGTTGCTTGTGATCATTTCTGGGCGGCGCCCACTTCAGGTCAGCGGTTCACCCTTGTCCGAGTTTCAAAGGGCAAATCTCCTGTCATGGGCGCGCCATTGTGCGCGAAATGGGAAGCTTGTTGAGCTTGTTGATGAGTCTATTGAATTGTTGGATAAGGAGCAGGCTCTTCTCTGCATCAGGGTGGCTTTGCTTTGCTTGCTGAAGTCACCTGCTCGTCGTCCTTCAATGAAGGAGGTTGTAGGAATGCTCAGTGGAGAATTGGAGCCTCCCCAATTGCCTGTTGAATACTCTCCTTCAACCCCTTCTAGGTTCCCTTTCAAGTCTAGGAGAAAAGGCAGTTTTGTTCCTAGGTGGAAGAGCCATGTTGGTGATACCAGTTGCAACAGAACATTGGAATTTGAAATGGTTAAATTCTTTGAAGCAGAATCTATCTATAAGCTTTTCTCATGTAATTATGTGTTAATGACTGCAATAGTGAAACCAGGCATACTTCCTTGTATGCAGTTACATGTGATCTCAAAGATTGTATATTTTGGTAAGTACTATAAAGGAAATATTATACTACAACGGTATTTCTTAAAATCCTCAAATTGCATGCTAAATTATCATGTATCAACTGCAGCGATGAACTAA 2349 0.4968 MPSRQLSTSPDIPDPYPFPQPPPRHHHHHHFLTPLLAATVSTCSLLLLLILFCHRTLTRKRATTHLPSPAATSPPHRLSFSVLRRATNSFSTRLGHGGFGPVFAGTLAGAPVAVKLMDSNTNHQQGEREFHNELFFASKLLSRHVITATHFSSDPKRRHFLLVYELMQNGNLQDALLHRKCPELLNWNTRFSIILNVGKGIHFLHSYDPPVIHGDIKPSNVLLDRDFWPRIGDFGLARLSSDTPRFEVEVLECGSVDNDEEKMKTKKKKEEEEVVVVDDCGSVESAHSVFMEEGDMGVEQSPSPEMAAMTSPETNLAVAEASPGFEKGSAQSEKEGVKKINEKGLKSNSVRDWWWKHEDEVGVGEGKKVKDYVMEWIGRDVNKERVKSGIELENVEIGKEEKNKKEKKRRKKELEWWESMEEEKFDGVVKGKRRTVREWWKEECFEENANAKTTKKKKKEKKKRKGGSVKSDDDENCGDDWWMSDDAMDKRKGKSRSRNNRGNMDCWMDGLSGELWRGRRNNSFDSASGEIPKSGGVSSTPSIRGTVCYVAPECGYGGEVSEKCDVYSFGVLLLVIISGRRPLQVSGSPLSEFQRANLLSWARHCARNGKLVELVDESIELLDKEQALLCIRVALLCLLKSPARRPSMKEVVGMLSGELEPPQLPVEYSPSTPSRFPFKSRRKGSFVPRWKSHVGDTSCNRTLEFEMVKFFEAESIYKLFSCNYVLMTAIVKPGILPCMQLHVISKIVYFGKYYKGNIILQRYFLKSSNCMLNYHVSTAAMN* 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1239 782 SUPERFAMILY Protein kinase-like (PK-like) 69 677 IPR011009 -
Gso9g1239 782 MobiDBLite consensus disorder prediction 451 503 - -
Gso9g1239 782 MobiDBLite consensus disorder prediction 1 27 - -
Gso9g1239 782 Gene3D Transferase(Phosphotransferase) domain 1 523 662 - -
Gso9g1239 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Gso9g1239 782 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 684 - -
Gso9g1239 782 SMART serkin_6 88 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1239 782 Pfam Protein tyrosine and serine/threonine kinase 543 654 IPR001245 GO:0004672|GO:0006468
Gso9g1239 782 ProSiteProfiles Protein kinase domain profile. 88 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1239 782 PANTHER OS07G0586332 PROTEIN 1 684 IPR044576 -
Gso9g1239 782 MobiDBLite consensus disorder prediction 466 493 - -
Gso9g1239 782 Pfam Protein kinase domain 92 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1239 782 Gene3D Transferase(Phosphotransferase) domain 1 73 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1239 Gso-Chr9 35538171 35541258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1239 533 655 Receptor kinase-like Gene Family AT3G58690 34.109 1.33e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gso9g1239 Pkinase 2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1239 - - gsj:114368603 1409.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1614 16 36778404 36782080 Gso9g1239 9 35538171 35541258 GST
Gso9g1239 9 35538171 35541258 Gso20g1223 20 42207315 42210493 PCT
Gso9g1239 9 35538171 35541258 Gso10g2155 10 48593369 48595724 PCT
Gso20g1223 20 42207315 42210493 Gso9g1239 9 35538171 35541258 PCT
Gso10g2155 10 48593369 48595724 Gso9g1239 9 35538171 35541258 PCT